DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and sks5

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_177743.1 Gene:sks5 / 843948 AraportID:AT1G76160 Length:541 Species:Arabidopsis thaliana


Alignment Length:558 Identity:115/558 - (20%)
Similarity:202/558 - (36%) Gaps:125/558 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 YGD----GVANPVMAVNRMVPGPSIELCENDTVVVDVLNYLSEPTTMHWHGVHMHRTPEMDGAPF 207
            |||    ||....:.:|...|||.|....||.::::|.|.|.||..:.|:|:...|...:||. :
plant    36 YGDIYPLGVRQQGILINGAFPGPDIHSVTNDNLIINVYNSLDEPFLLSWNGIQQRRNSFVDGV-Y 99

  Fly   208 ITQYPLQPGEVQRHEFKV-DRSGSLWYHSHVGWQRGFGVAGAFVVRQTSQENQHSQLYDYDLVEH 271
            .|..|:.||:...:..:: |:.||.:|...:|:.:..|..|.  :|..|:........| ...:.
plant   100 GTTCPIPPGKNYTYILQMKDQIGSFYYFPSLGFHKAAGGFGG--IRILSRPRIPVPFPD-PAGDT 161

  Fly   272 TLMIQDIFYEYNLQDVRNILVNGKGRNHLSQLPDN---DNRHRYERLRVTPGYRYRMRVILNGIA 333
            |::|.| :|:.|..|:|..|.|||    ...|||.   :.|.....|.|..|..||.|:...|:.
plant   162 TVLIGD-WYKANHTDLRAQLDNGK----KLPLPDGILINGRSSGATLNVEQGKTYRFRISNVGLQ 221

  Fly   334 NCPVEFSIEQHRLLMISTDGNDIEPVLADGFFLTSAERFDFVLEANQYKKNYWIRIKGYEQCENR 398
            : .:.|.|:.|::.::..:|............:...:.:..::.|:|..::|::.:         
plant   222 D-SLNFRIQDHKMKVVEVEGTHTLQTTFSSLDVHVGQSYSVLVTADQTPRDYYVVV--------- 276

  Fly   399 NIYQGAVLSYRGSARSELPQGDILDKPSSRAADEDLILVNDFRFKPANSTAISSLRQSLDKDNNV 463
                                       |||.....|.....||:                 .|:.
plant   277 ---------------------------SSRFTSNVLTTTGIFRY-----------------SNSA 297

  Fly   464 GTVALRSVDPVP--------WT--RYTKFLTHYSSFGSRTAP----------------------- 495
            |.|:    .|:|        |:  :.....|:.|:.|.|..|                       
plant   298 GGVS----GPIPGGPTIQIDWSLNQARAIRTNLSASGPRPNPQGSYHYGMINTTRTIRLASSAGQ 358

  Fly   496 -NGEVLFQISDISYNSPGISLLQGRHLYQDDRYFCNKSSLAAEGRNCERELCECVNVMRLPAYRP 559
             :|:..:.::.:|:......|....:...|..|..........|.....:    .:||::.....
plant   359 VDGKQRYAVNSVSFKPADTPLKIADYFKIDGVYRSGSIQYQPTGGGIYLD----TSVMQVDYRTF 419

  Fly   560 LEMVVANYLDSTHPFHIHGFTFRLVGQGVLGNLNDLRNIQELDRRGRLPRLSEDSAAVAKDTVQI 624
            :|::..|..|....:|:.|::|.:||........|.||  |.:.|.          |||:.|||:
plant   420 VEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWSPDSRN--EYNLRD----------AVARCTVQV 472

  Fly   625 PGQGYIIVRFISNNPGFWLYHCHVEAHAVQGMVAVLKI 662
            ....:..:....:|.|.|.......|....|....|::
plant   473 YPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRV 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 31/107 (29%)
laccase 151..656 CDD:274556 109/542 (20%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 29/140 (21%)
sks5NP_177743.1 PLN02991 10..541 CDD:215536 115/558 (21%)

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