DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and sks18

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_177707.1 Gene:sks18 / 843912 AraportID:AT1G75790 Length:545 Species:Arabidopsis thaliana


Alignment Length:614 Identity:138/614 - (22%)
Similarity:230/614 - (37%) Gaps:153/614 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 YQLVVHNYQR--LGPECQRCQFDERACASEHCIYGDGVANPVMAVNRMVPGPSIELCENDTVVVD 178
            ||.||...||  ||...|                       |:.:|.|.|||.:....||.:||:
plant    29 YQWVVSYSQRFILGGNKQ-----------------------VIVINDMFPGPILNATANDIIVVN 70

  Fly   179 VLNYLSEPTTMHWHGVHMHRTPEMDGAPFITQYPLQPGEVQRHEFKV-DRSGSLWYHSHVGWQRG 242
            :.|.|.||..|.|:|:.:.:....||... |..|:.||....:.|:| |:.||.:|...:..|:.
plant    71 IFNNLPEPFLMTWNGLQLRKNSWQDGVRG-TNCPILPGTNWTYRFQVKDQIGSYFYFPTLLLQKA 134

  Fly   243 FGVAGAF---------VVRQTSQENQHSQLYDYDLVEHTLMIQDIFYEYNLQDVRNILVNGKGRN 298
            .|..||.         |......|.....:.|:..::||:|...:...::|.:...||.||:|  
plant   135 AGGYGAIRIYPPELVPVPFPKPDEEYDILIGDWFYLDHTVMRASLDAGHSLPNPDGILFNGRG-- 197

  Fly   299 HLSQLPDNDNRHRYERLRVTPGYRYRMRVILNGIANCPVEFSIEQHRLLMISTDGNDIEPVLADG 363
                 |: :....:|     ||..||:|:...|:..| :.|.|:.|.:|::.|:|..::..:...
plant   198 -----PE-ETFFAFE-----PGKTYRLRISNVGLKTC-LNFRIQDHDMLLVETEGTYVQKRVYSS 250

  Fly   364 FFLTSAERFDFVLEANQ----YKKNYWIRIKGYEQCENRNIYQG--AVLSYRGSARSELPQGDIL 422
            ..:...:.:..::.|..    ..::|:|    :......:.|.|  |::.|.||....:.||.: 
plant   251 LDIHVGQSYSILVTAKTDPVGIYRSYYI----FATARFTDSYLGGIALIRYPGSPLDPVGQGPL- 310

  Fly   423 DKPSSRAADEDLILVNDFRFKPANSTAISSLRQSLD--KDNNVGTVALRSVDPVPWTRYTKFLTH 485
                                .||.....||:.|:|.  .|.|||  |.||   .|...|     |
plant   311 --------------------APALQDFGSSVEQALSIRMDLNVG--AARS---NPQGSY-----H 345

  Fly   486 YSSFG-SRT--------APNGEVLFQISDISYNSPGISLLQGRHLYQDDR--------YFCNKSS 533
            |.... :||        ..:|::.:.|:.:|:..|...|....|...:|.        |..||:.
plant   346 YGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPETPLKLVDHFQLNDTIIPGMFPVYPSNKTP 410

  Fly   534 LAAEGRNCERELCECVNVMRLPAYRPLEMVVANYLDSTHPFHIHGFTFRLVGQGVLGNLNDLR-- 596
            ...            .:|:.:.....:.:|..|.|.....:||.|:.|.:||.| .|..::.:  
plant   411 TLG------------TSVVDIHYKDFIHIVFQNPLFGLESYHIDGYNFFVVGYG-FGAWSESKKA 462

  Fly   597 --NIQELDRRGRLPRLSEDSAAVAKDTVQIPGQGYIIVRFISNNPGFWLYHCHVEAHAVQGMVAV 659
              |:.:               ||::.|||:....:..:....:|.|.|............|....
plant   463 GYNLVD---------------AVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELY 512

  Fly   660 LKI-GE-DHQMKNIPAR---------VRC 677
            ::: || :.....||.|         :||
plant   513 MRVKGEGEEDPSTIPVRDENPIPGNVIRC 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 34/112 (30%)
laccase 151..656 CDD:274556 121/543 (22%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 30/143 (21%)
sks18NP_177707.1 PLN02168 1..545 CDD:215113 138/614 (22%)

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