DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and sks12

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_175953.1 Gene:sks12 / 842006 AraportID:AT1G55570 Length:555 Species:Arabidopsis thaliana


Alignment Length:533 Identity:118/533 - (22%)
Similarity:211/533 - (39%) Gaps:106/533 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 YGD----GVANPVMAVNRMVPGPSIELCENDTVVVDVLNYLSEPTTMHWHGVHMHRTPEMDGAPF 207
            ||.    ||...|:.:|...|||:|....|:.|:|:|.|.|.||..:.|.|:...:....||...
plant    37 YGTASPLGVPQQVILINGQFPGPNINSTSNNNVIVNVFNNLDEPFLITWAGIQHRKNCWQDGTAG 101

  Fly   208 ITQYPLQPGEVQRHEFK-VDRSGSLWYHSHVGWQRGFGVAGAFVVRQTSQENQHSQL-----YDY 266
             |..|:.||:...:.|: .|:.||.:|:......|..|..|...|        :|:|     |..
plant   102 -TMCPIPPGQNFTYHFQPKDQIGSYFYYPTTAMHRAAGGFGGLRV--------NSRLLIPVPYAD 157

  Fly   267 DLVEHTLMIQDIFYEYNLQDVR------------NILVNGK-GRNHLSQLPDNDNRHRYERLRVT 318
            ...::|::|.|.:.:.:.|..:            .||:||| |:...|..|         ...:.
plant   158 PEDDYTILINDWYTKSHTQLKKFLDSGRTIGRPDGILINGKSGKTDGSDKP---------LFTLK 213

  Fly   319 PGYRYRMRVILNGIANCPVEFSIEQHRLLMISTDGNDIEPVLADGFFLTSAERFDFVLEANQYKK 383
            ||..||:|:...|: ...:.|.|:.|::.::..:|:.:.....|...:...:.|..::.|:|..|
plant   214 PGKTYRVRICNVGL-KASLNFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGVIVTADQEPK 277

  Fly   384 NYWIRIKGYEQCENRNI-----------YQGAVLSYRGSARSELPQGDILDKPSSRAADEDLILV 437
            :|      |.....|.:           |:|.    :|.|.|:||..     |...|..     :
plant   278 DY------YMIASTRFLKKPLTTTGLLRYEGG----KGPASSQLPAA-----PVGWAWS-----L 322

  Fly   438 NDFRFKPANSTAISSLRQSLDKDNNVGTVALRSVDPVPWTRYTKFLTHYSSFGSRTAPNGEVLFQ 502
            |.:|....|.|| |:.|.:.....:.|.:.:        ||..|.:      .::...:|::.:.
plant   323 NQYRSFRWNLTA-SAARPNPQGSYHYGKINI--------TRTIKLV------NTQGKVDGKLRYA 372

  Fly   503 ISDISYNSPGISLLQGRHLYQDDRYFCNKSSLAAEGRNCE--RELCECVNVMRLPAYRPLEMVVA 565
            :|.:|:..|...|....:....|:.|  |....::..|.:  :.:....||:.:.....:|:|..
plant   373 LSGVSHTDPETPLKLAEYFGVADKVF--KYDTISDNPNPDQIKNIKIEPNVLNITHRTFIEVVFE 435

  Fly   566 NYLDSTHPFHIHGFTFRLVG-QGVLGNLNDLRNIQELDRRGRLPRLSEDSAAVAKDTVQIPGQGY 629
            |:..|...:|:.|::|..|. :.........:|...||             ||::.|||:..:.:
plant   436 NHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLD-------------AVSRHTVQVYPKCW 487

  Fly   630 IIVRFISNNPGFW 642
            ..:....:|.|.|
plant   488 AAILLTFDNCGMW 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 32/107 (30%)
laccase 151..656 CDD:274556 115/525 (22%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 32/161 (20%)
sks12NP_175953.1 PLN02354 2..554 CDD:177987 118/533 (22%)

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