DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and sks14

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_564697.1 Gene:sks14 / 842005 AraportID:AT1G55560 Length:549 Species:Arabidopsis thaliana


Alignment Length:536 Identity:117/536 - (21%)
Similarity:203/536 - (37%) Gaps:113/536 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 YGD----GVANPVMAVNRMVPGPSIELCENDTVVVDVLNYLSEPTTMHWHGVHMHRTPEMDGAPF 207
            ||.    ||...|:.:|...|||::....|:.||::|.|:|.||..:.|.|:...:....||...
plant    34 YGTASPLGVPQKVILINGQFPGPNLNSTSNNNVVINVFNHLDEPFLLTWSGIQHRKNCWQDGVAG 98

  Fly   208 ITQYPLQPGEVQRHEFK-VDRSGSLWYHSHVGWQR---GFGVAGAFV-------VRQTSQENQHS 261
             |..|:..|:...:.|: .|:.||.:|:......|   |||  |..|       |.....|:.::
plant    99 -TSCPIPAGQNFTYHFQPKDQIGSYFYYPTTSLHRFAGGFG--GLRVNSRLLIPVPYADPEDDYT 160

  Fly   262 QLY-DYDLVEHTLMIQDIFYEYNLQDVRNILVNGK-----GRNHLSQLPDNDNRHRYERLRVTPG 320
            .|. |:....||.:...:.....|.....:|:|||     |:|.             ....:.||
plant   161 VLLGDWYTAGHTALKNFLDSGRTLGLPNGVLINGKSGKVGGKNE-------------PLFTMKPG 212

  Fly   321 YRYRMRVILNGIANCPVEFSIEQHRLLMISTDGNDIEPVLADGFFLTSAERFDFVLEANQYKKNY 385
            ..|:.|:...|..: .:.|.|:.|::.::..:|:.:.....|...:...:.|..::.|||..|:|
plant   213 KTYKYRLCNVGFKS-TLNFRIQNHKMKLVEMEGSHVIQNDYDSLDVHVGQCFSVLVTANQAAKDY 276

  Fly   386 WIRIKGYEQCENRNIYQGAVLSYRGS---ARSELPQGDILDKPSSRAADEDLILVNDFRFKPANS 447
            :  :....:...:.:....|:.|.||   |.:|||:.     |...|..     :|.||      
plant   277 Y--MVASTRFLKKELSTVGVIRYEGSNVQASTELPKA-----PVGWAWS-----LNQFR------ 323

  Fly   448 TAISSLRQSLDKDNNVGTVALRSVDPVPWTRYTKFLTHYSSF---------GSRTAPNGEVLFQI 503
                |.|.:|..:         :..|.|...|     ||...         .|::..:|:|.|..
plant   324 ----SFRWNLTSN---------AARPNPQGSY-----HYGKINITRSIKLVNSKSVVDGKVRFGF 370

  Fly   504 SDISYNSPGISLLQGRHLYQDDRYF---CNKSSLAAEGRNCERELCECVNVMRLPAYRPLEMVVA 565
            :.:|:......|....:....::.|   ..|...||:    ...|....||:.:.....:|::..
plant   371 NGVSHVDTETPLKLAEYFQMSEKVFKYNVIKDEPAAK----ITALTVQPNVLNITFRTFVEIIFE 431

  Fly   566 NYLDSTHPFHIHGFTFRLVGQGVLGNLNDLRNIQELDRRGR-LPRLSED---SAAVAKDTVQIPG 626
            |:..:...||:.|::|..|.                ...|| .|...|:   ..||::.|||:..
plant   432 NHEKTMQSFHLDGYSFFAVA----------------SEPGRWTPEKRENYNLLDAVSRHTVQVYP 480

  Fly   627 QGYIIVRFISNNPGFW 642
            :.:..:....:|.|.|
plant   481 KSWSAILLTFDNAGMW 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 33/117 (28%)
laccase 151..656 CDD:274556 114/528 (22%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 26/142 (18%)
sks14NP_564697.1 PLN02354 1..549 CDD:177987 117/536 (22%)

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