DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and SKS6

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_564479.1 Gene:SKS6 / 840792 AraportID:AT1G41830 Length:542 Species:Arabidopsis thaliana


Alignment Length:535 Identity:119/535 - (22%)
Similarity:216/535 - (40%) Gaps:79/535 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 YGD----GVANPVMAVNRMVPGPSIELCENDTVVVDVLNYLSEPTTMHWHGVHMHRTPEMDGAPF 207
            |||    ||....:.:|...|||.|....||.::::|.|.|.||..:.|:||...|...:||. :
plant    37 YGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVHNSLDEPFLISWNGVQNRRNSYVDGM-Y 100

  Fly   208 ITQYPLQPGEVQRHEFKV-DRSGSLWYHSHVGWQRGFGVAGAFVVRQTSQENQHSQLYDYDLVEH 271
            .|..|:.|.....:..:| |:.||.:|...:.:.:..|..|.  :|..|:........| ...::
plant   101 GTTCPIPPRSNYTYILQVKDQIGSFYYFPSLAFHKAAGGFGG--IRILSRPGIPVPFAD-PAGDY 162

  Fly   272 TLMIQDIFYEYNLQDVRNILVNGKGRNHLSQLPDND-----NRHRYERLRVTPGYRYRMRVILNG 331
            |::|.| :|::|..|:::.|..|:      :||..|     .|.....|.|..|..||:|:...|
plant   163 TVLIGD-WYKFNHTDLKSRLDRGR------KLPSPDGILINGRSNGATLNVEQGKTYRLRISNVG 220

  Fly   332 IANCPVEFSIEQHRLLMISTDGNDIEPVLADGFFLTSAERFDFVLEANQYKKNYWIRIKGYEQCE 396
            :.: .:.|.|:.||:.::..:|......:.....:...:.:..::.|:|..::|::.:.  .:..
plant   221 LQD-SLNFRIQNHRMKLVEVEGTHTLQTMFSSLDVHVGQSYSVLITADQSPRDYYVVVS--SRFT 282

  Fly   397 NRNIYQGAVLSYRGS---ARSELPQGDILDKPSSRAADEDLILVNDFRFKPANSTAISSLRQSLD 458
            ::.|....||.|.||   |...:|.|..:....|         :|..|....|.|| |..|.:..
plant   283 DKIITTTGVLRYSGSSTPASGPIPGGPTIQVDWS---------LNQARAIRTNLTA-SGPRPNPQ 337

  Fly   459 KDNNVGTVAL-RSVDPVPWTRYTKFLTHYSSFGSRTAP-NGEVLFQISDISYNSPGISLLQGRHL 521
            ...:.|.:.| |::                .|||.... ||:..:.::.:|:......|......
plant   338 GSYHYGLIPLIRTI----------------VFGSSAGQINGKQRYGVNSVSFVPADTPLKLADFF 386

  Fly   522 YQDDRYFCNKSSLAAEGRNCERELCECVNVMRLPAYRPLEMVVANYLDSTHPFHIHGFTFRLV-- 584
            .....|..|..|    .:.....|....:|:::.....:|:|..|..|....:|::|::|.:|  
plant   387 KISGVYKINSIS----DKPTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGM 447

  Fly   585 --GQGVLGNLNDLRNIQELDRRGRLPRLSEDSAAVAKDTVQIPGQGYIIVRFISNNPGFWLYHCH 647
              ||...|:.|.. |:::               ||::.|||:..:.:..:....:|.|.|.....
plant   448 DGGQWKTGSRNGY-NLRD---------------AVSRSTVQVYPKSWTAIYIALDNVGMWNLRSE 496

  Fly   648 VEAHAVQGMVAVLKI 662
            ..|....|....|::
plant   497 FWARQYLGQQLYLRV 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 31/107 (29%)
laccase 151..656 CDD:274556 113/519 (22%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 30/142 (21%)
SKS6NP_564479.1 PLN02991 12..539 CDD:215536 119/535 (22%)

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