DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and sks17

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_569041.1 Gene:sks17 / 836826 AraportID:AT5G66920 Length:546 Species:Arabidopsis thaliana


Alignment Length:558 Identity:110/558 - (19%)
Similarity:203/558 - (36%) Gaps:136/558 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 GVANPVMAVNRMVPGPSIELCENDTVVVDVLNYLSEPTTMHWHGVHMHRTPEMDGAPFITQYPLQ 214
            ||...|:.:|...|||.:|:..||.::::::|.|.:|..:.|:|:...:....||. ..|..|:|
plant    52 GVPQQVILINGQFPGPKLEVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGV-LGTNCPIQ 115

  Fly   215 PGEVQRHEFKV-DRSGSLWYHSHVGWQRGFGVAGAFVVRQTSQENQHSQ-----LYDYDLVEHTL 273
            |.....::|:. |:.|:..|.....:.:..|..||.        |.:::     .|.....:.||
plant   116 PNSNFTYKFQTKDQIGTFNYFPSTAFHKAAGGFGAI--------NVYARPGIPIPYPLPTADFTL 172

  Fly   274 MIQDIFYEYNLQDVR-------------NILVNGKGRNHLSQLPDNDNRHRYERLRVTPGYRYRM 325
            ::.| :::.|.:.::             .:|:||:.::..|    .|.           |..|.:
plant   173 LVGD-WFKTNHKTLQQRLDSGGVLPFPDGMLINGQTQSTFS----GDQ-----------GKTYML 221

  Fly   326 RVILNGIANCPVEFSIEQHRLLMISTDGNDIEPVLADGFFLTSAERFDFVLEANQYKKNYWIRIK 390
            |:...|::: ...|.|:.|.:.::..:|:.:.....|...:...:....::..||..|:|:|   
plant   222 RISNVGLSS-TFNFRIQGHTMKVVEVEGSHVIQTDYDSLDIHVGQSLAVLVTLNQSPKDYYI--- 282

  Fly   391 GYEQCENRNIYQGAVLSYRGSARSELPQGDILDKPSSRAADEDLILVNDFRFKPAN--------S 447
                          |.|.| ..||:|....:|...:||.              ||:        .
plant   283 --------------VASTR-FIRSKLSVMGLLRYSNSRV--------------PASGDPPALPPG 318

  Fly   448 TAISSLRQSLDKDNNVGTVALRSVDPVPWTRYTKFLTHYSSFG-------SRTAP--NGEVLFQI 503
            ..:.|:||:.....|:...|.|   |.|...:     ||....       |.:||  ||:..:.:
plant   319 ELVWSMRQARTFRWNLTANAAR---PNPQGSF-----HYGMISPTKTFVFSNSAPLINGKQRYAV 375

  Fly   504 SDISYNSPGISLLQGRHLYQDDRYFCNKSSLAAEGRNCERELCECVNVMRLPAYRPLEMVVANYL 568
            :.:||......|....|......:..|    |.:............:|::...:..||:|..|..
plant   376 NGVSYVKSETPLKLADHFGISGVFSTN----AIQSVPSNSPPTVATSVVQTSHHDFLEIVFQNNE 436

  Fly   569 DSTHPFHIHGFTFRLVGQG---------VLGNLNDLRNIQELDRRGRLPRLSEDSAAVAKDTVQI 624
            .|...:|:.|:.|.:||.|         .|.||.|                     |:.:.|.|:
plant   437 KSMQSWHLDGYDFWVVGFGSGQWTPAKRSLHNLVD---------------------ALTRHTTQV 480

  Fly   625 PGQGYIIVRFISNNPGFWLYHCHVEAHAVQGMVAVLKI 662
            ..:.:..:....:|.|.|.....:......|....||:
plant   481 YPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKV 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 28/102 (27%)
laccase 151..656 CDD:274556 106/549 (19%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 24/150 (16%)
sks17NP_569041.1 PLN02835 28..546 CDD:178429 110/558 (20%)

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