DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and SKS2

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_199961.1 Gene:SKS2 / 835222 AraportID:AT5G51480 Length:592 Species:Arabidopsis thaliana


Alignment Length:530 Identity:131/530 - (24%)
Similarity:208/530 - (39%) Gaps:99/530 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 GVANPVMAVNRMVPGPSIELCENDTVVVDVLNYLSEPTTMHWHGVHMHRTPEMDGAPFITQYPLQ 214
            ||...|:|||...|||.|....|..|.|:|||:|.||..:.|.||.|.|....||. ..|..|:.
plant    43 GVPQQVIAVNGKFPGPVINATTNYNVHVNVLNHLDEPLLLTWPGVQMRRNSWQDGV-LGTNCPIP 106

  Fly   215 PGEVQRHEFKV-DRSGSLWYHSHVGWQRGFGVAGAFVVRQ--------TSQENQHSQLY-DYDLV 269
            |.....::|:: |:.||.:|...:.:||..|..||.::..        |..:.:...:. |:...
plant   107 PNWNFTYDFQLKDQIGSYFYSPSLNFQRASGGFGALIINNRDLVPIPFTEPDGEIIFIIGDWYTQ 171

  Fly   270 EHTLM--IQDIFYEYNLQDVRNILVNGKGR-NHLSQLPDNDNRHRYERLRVTPGYRYRMRVILNG 331
            .||.:  |.|...|..:.|  .:|:||||. .:.|.:||.   ..:|.:.|.||..||:||...|
plant   172 NHTALRRILDSGKELGMPD--GVLINGKGPFKYNSSVPDG---IEHETVNVDPGKTYRIRVHNVG 231

  Fly   332 IANCPVEFSIEQHRLLMISTDGN----------DIEPVLADGFFLT----SAERFDFVLEANQYK 382
            |:. .:.|.|:.|:||:|.|:|.          |:....:..|.:|    :...:..|..|....
plant   232 IST-SLNFRIQNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVN 295

  Fly   383 KNYWIRIKGYEQCENRNIYQGAVLSY---RGSARSELPQGDILDKPSSRAADEDLILVNDFRFKP 444
            :..|.|:.|.           .:|.|   :|.|...||       .|:...:.....:|..|...
plant   296 ETVWQRVTGV-----------GILHYSNSKGPASGPLP-------VSATDVNHPWSAMNQPRAIK 342

  Fly   445 ANSTAISSLRQSLDKDNNVG------TVALRSVDPVPWTRYTKFLTHYSSFGSRTAPNGEVLFQI 503
            .|::| |..|.:.....:.|      |..|||:.|                   |..||::...:
plant   343 QNTSA-SGARPNPQGSFHYGQINITRTYILRSLPP-------------------TKINGKLRATL 387

  Fly   504 SDISYNSPGISLLQGRHLYQDDRYFCNKSSLAAEGRNCERELCECVNVMRLPAYRP-LEMVVANY 567
            :.||:.:|...:     ...||........|....|..:.:|....:.:....|:. ::::..|.
plant   388 NGISFVNPSTPM-----RLADDHKVKGDYMLDFPDRPLDEKLPRLSSSIINATYKGFIQVIFQNN 447

  Fly   568 LDSTHPFHIHGFTFRLVGQGVLGNLNDLRNIQELDRRGRLPRLSEDSAAVAKDTVQIPGQGYIIV 632
            ......|||.|:.|.:|... .|..::.||..           ..:..|||:.||::....:..|
plant   448 DTKIQSFHIDGYAFYVVAMD-FGIWSEDRNSS-----------YNNWDAVARSTVEVYPGAWTAV 500

  Fly   633 RFISNNPGFW 642
            ....:|.|.|
plant   501 LISLDNVGVW 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 39/102 (38%)
laccase 151..656 CDD:274556 130/529 (25%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 41/154 (27%)
SKS2NP_199961.1 PLN00044 23..589 CDD:165622 131/530 (25%)

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