DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and SKS1

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_194254.2 Gene:SKS1 / 828627 AraportID:AT4G25240 Length:589 Species:Arabidopsis thaliana


Alignment Length:545 Identity:132/545 - (24%)
Similarity:213/545 - (39%) Gaps:130/545 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 GVANPVMAVNRMVPGPSIELCENDTVVVDVLNYLSEPTTMHWHGVHMHRTPEMDGAPFITQYPLQ 214
            ||...|:|||...|||.:....|..|||:|.|:|.||..:.|.|:.|.|....||. ..|..|:.
plant    44 GVPQQVIAVNGQFPGPLLNATTNYNVVVNVFNHLDEPLLLTWPGIQMRRNSWQDGV-LGTNCPIP 107

  Fly   215 PGEVQRHEFKV-DRSGSLWYHSHVGWQRGFGVAGAFVVR----------QTSQE------NQHSQ 262
            |.....::|:| |:.||.:|...:.:||..|..|..|:.          |...|      :.::|
plant   108 PRWNFTYQFQVKDQIGSFFYSPSLNFQRASGGFGPIVINNRDIIPIPFPQPDGELIFIIGDWYTQ 172

  Fly   263 LYDYDLVEHTLMIQDIFYEYNLQDVRNILVNGKG-RNHLSQLPDNDNRHRYERLRVTPGYRYRMR 326
              |:..:...|   |...|..:.|  .:|:|||| ..:.|.:||..:   |....|.||..||:|
plant   173 --DHKALRRAL---DSGKELGMPD--GVLINGKGPYKYNSSVPDGID---YLTFHVEPGKTYRIR 227

  Fly   327 VILNGIANCPVEFSIEQHRLLMISTDGN----------DIEPVLADGFFLT----SAERFDFVLE 377
            |...||:. .:.|.|:.|.||::.|:|:          |:....:..|.:|    :...:..|..
plant   228 VHNVGIST-SLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVAS 291

  Fly   378 ANQYKKNYWIRIKGYEQCENRNIYQGAVLSY---RGSARSEL--PQGDILDKPSSRAADEDLILV 437
            |....:..|.|:.|.           |:|.|   :|.....|  |:.|: ..|.|..:....|..
plant   292 ARFVNETVWQRVTGV-----------AILHYSNSKGPVSGPLPVPKTDV-SSPWSAMSQPKTIRQ 344

  Fly   438 NDFRFKPANSTAISSLRQS------LDKDNNVGTVALRSVDPVPWTRYTKFLTHYSSFGSRTAPN 496
            |         |:.|..|.:      ..:.|...|..|||:.|                   |..|
plant   345 N---------TSASGARPNPQGSFHYGQINITNTYILRSLPP-------------------TIIN 381

  Fly   497 GEVLFQISDISYNSPGISL-------LQGRH-LYQDDRYFCNKSSLAAEGRNCERELCECVNVMR 553
            |.:...::.||:.:|...:       ::|.: |...||.|.....|       :|.:   :|.  
plant   382 GALRATLNGISFVNPSTPVRLADRNKVKGAYKLDFPDRPFNRPLRL-------DRSM---INA-- 434

  Fly   554 LPAYRP-LEMVVANYLDSTHPFHIHGFTFRLVGQGVLGNLNDLRNIQELDRRGRLPRLSEDSAAV 617
              .|:. :::|..|.......||:.|::|.:||...        .|...|::|..    .:..|:
plant   435 --TYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDF--------GIWSEDKKGSY----NNWDAI 485

  Fly   618 AKDTVQIPGQGYIIVRFISNNPGFW 642
            ::.|:::...|:..|....:|.|.|
plant   486 SRSTIEVYPGGWTAVLISLDNVGVW 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 38/102 (37%)
laccase 151..656 CDD:274556 131/544 (24%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 39/152 (26%)
SKS1NP_194254.2 PLN00044 15..562 CDD:165622 132/545 (24%)

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