DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and sks4

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_193932.1 Gene:sks4 / 828290 AraportID:AT4G22010 Length:541 Species:Arabidopsis thaliana


Alignment Length:544 Identity:118/544 - (21%)
Similarity:204/544 - (37%) Gaps:135/544 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 YGD----GVANPVMAVNRMVPGPSIELCENDTVVVDVLNYLSEPTTMHWHGVHMHRTPEMDGAPF 207
            |||    ||....:.:|...|||.|:...||.:::.|.|||.||..:.|:||...:....||. .
plant    34 YGDIYPLGVKQQGILINGQFPGPHIDAITNDNIIISVFNYLKEPFLISWNGVQQRKNSWQDGV-V 97

  Fly   208 ITQYPLQPGEVQRHEFKV-DRSGSLWYHSHVGWQRGFGVAGAFVVRQTSQEN-------QHSQLY 264
            .|..|:.||:...:..:| |:.||.:|...:.:.:..|..||  :|..|:..       .....:
plant    98 GTTCPIPPGKNFTYVIQVKDQIGSFYYFPSLAFHKAAGAFGA--IRVWSRPRIPVPFSPPDGDFW 160

  Fly   265 ----DYDLVEHTLMIQDIFYEYNLQDVRNILVNGKGRNHLSQLPDNDNRHRYERLRVTPGYRYRM 325
                |:....|.::.:.:....||.:...:|:||:|...             ....|.||..||.
plant   161 LLAGDWYKTNHYVLRRLLEAGRNLPNPDGVLINGRGWGG-------------NTFTVQPGKTYRF 212

  Fly   326 RVILNGIANCPVEFSIEQHRLLMISTDGNDIEPVLADGFFLTSAERFDFVLEANQYKKNYWIRIK 390
            |:...|:|. .:.|.|:.|.:.::..:|:.....:.....:...:.:..::.|||..::|:|.|.
plant   213 RISNVGVAT-SLNFRIQGHTMKLVEVEGSHTVQNIYTSLDIHLGQSYSVLVTANQAPQDYYIVIS 276

  Fly   391 GYEQCENRNIYQGAVLSYRGSAR---SELPQGDILDKPSSRAADEDLILVNDFRFKPANSTAISS 452
              .:...:.:...::|.|..|.:   ..:|.|..||..||      |......|   .|.||   
plant   277 --SRFTRKVLTTTSILHYSNSRKGVSGPVPNGPTLDIASS------LYQARTIR---RNLTA--- 327

  Fly   453 LRQSLDKDNNVGTVALRSVDP---------VPWTR-YTKFLTHYSSFGSRTAPNGEVLFQISDIS 507
               |..:.|..|:.....:.|         .||.. ..::..:.:||.:...|     .:::|. 
plant   328 ---SGPRPNPQGSYHYGLIKPGRTIILANSAPWINGKQRYAVNGASFVAPDTP-----LKLADY- 383

  Fly   508 YNSPGISLL----------QGRHLYQDDRYFCNKSSLAAEGRNCERELCECVNVMRLPAYRPLEM 562
            :..||:..|          .|.:|        ..|.:||..|..                  :|:
plant   384 FKIPGVFNLGSIPTSPSGGNGGYL--------QSSVMAANFREF------------------IEV 422

  Fly   563 VVANYLDSTHPFHIHGFTFRLV----GQGVLG-----NLNDLRNIQELDRRGRLPRLSEDSAAVA 618
            |..|:.:|...:|:.|::|.:|    ||...|     ||.|                     ||:
plant   423 VFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRD---------------------AVS 466

  Fly   619 KDTVQIPGQGYIIVRFISNNPGFW 642
            :.|||:..:.:..:....:|.|.|
plant   467 RSTVQVYPRAWTAIYIALDNVGMW 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 33/107 (31%)
laccase 151..656 CDD:274556 114/536 (21%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 26/137 (19%)
sks4NP_193932.1 PLN02991 9..538 CDD:215536 118/544 (22%)

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