DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco3 and Mco1

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_609287.3 Gene:Mco1 / 34258 FlyBaseID:FBgn0032116 Length:959 Species:Drosophila melanogaster


Alignment Length:747 Identity:245/747 - (32%)
Similarity:352/747 - (47%) Gaps:141/747 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IVLLIFASNPSQCESSKDDFPQAKFEWPSFAWMRNKTTKGTPALDLKNDYSQMELANFGD----- 96
            ||:..:..|   |.:..:|.|.::.|      .||......|....:.:..|..:|...|     
  Fly   182 IVMNTYKRN---CPALTEDCPASRLE------ERNCCPYCRPLQTARIEELQDNVAESTDDIWTA 237

  Fly    97 --FDRHPCRRVCQQG-QSQNCYYQLVVHNYQRLGPECQRCQFDERACASEHCIYGDGVANPVMAV 158
              :..|||.|.||.| :...|.|:.||..||.....|..|..:...|:..||:.|||:...:..|
  Fly   238 EWYRNHPCNRDCQVGAEPMTCRYKFVVEWYQTFSKACYDCPRNLTDCSRPHCVMGDGLERSITVV 302

  Fly   159 NRMVPGPSIELCENDTVVVDVLNY-LSEPTTMHWHGVHMHRTPEMDGAPFITQYPLQPGEVQRHE 222
            |||:|||:||:||.|.:||||.|: |.|.|::||||:|..:||.|||.|.|||.|:.|....|:.
  Fly   303 NRMMPGPAIEVCEGDEIVVDVKNHLLGESTSIHWHGLHQKKTPYMDGVPHITQCPITPHATFRYS 367

  Fly   223 FKVDRSGSLWYHSHVGWQRGFGVAGAFVVRQTSQENQHSQLYDYDLVEHTLMIQD---------- 277
            |..|.||:.::|||.|.|||.||.||.::|:......|..|||:||.||.:::||          
  Fly   368 FPADLSGTHFWHSHTGMQRGDGVFGALIIRKPKTAEPHGGLYDFDLSEHVMIVQDWIHDTGASIF 432

  Fly   278 IFYEYNLQDVR--NILVNGKGR------------------------------------------- 297
            .::.::..|.:  |:|||||||                                           
  Fly   433 SYHHHSRGDNKPHNLLVNGKGRYYNRIWAEAKQAHRRAEERTTQPVEPLPKSQVDFVQTLPRQAR 497

  Fly   298 ----NHLSQLPDNDNRHR------------YERLRVTPGYRYRMRVILNGIANCPVEFSIEQHRL 346
                |.....|.|..:.|            ::...|..|:|||.|:|.....|||:..||:.|.|
  Fly   498 LAKTNTTKLFPVNSRQKRGNLNEIPLELVPHQIYTVRRGFRYRFRIINAEYLNCPIVVSIDGHNL 562

  Fly   347 LMISTDGNDIEPVLADGFFLTSAERFDFVLEANQYKKNYWIRIKGYEQCEN--RNIYQGAVLSYR 409
            ..|::||.|||.:........|.|||||||.||....|||||:||...|..  .:.:|.|:|.|.
  Fly   563 TAINSDGFDIEAMDVGSIVTYSGERFDFVLNANLEVGNYWIRLKGLMDCSEVFTSAFQVAILRYE 627

  Fly   410 GSARSELPQGDILDKPSSRAADEDLILVNDFRFKPANSTAISSLRQSLDKDNNVGTVALRSVDPV 474
            | |..|.|..::  ....:|...:|.::|.....|...| ::.:|            ||...|.|
  Fly   628 G-APDEEPTAEL--SYGHKAEGIELNVMNRGPGYPDTKT-VAEMR------------ALPIYDHV 676

  Fly   475 ---------PWTRYTKFLTHYSSFGSR----------------TAPNGEVLFQISDISYNSPGIS 514
                     |...| ||..:|..:...                |..|.....|::.|:.|.|.::
  Fly   677 SGIDHDTLKPEADY-KFFIYYDFYTKNNPDFHDKDLYAMDMEMTQQNRLYTPQLNHITLNFPSLA 740

  Fly   515 LLQGRHLYQDDRYFCNKSSLAAEGRNCERELCECVNVMRLPAYRPLEMVVAN----YLDSTHPFH 575
            ||..|...:|.. |||::||..:|.:|.:|.|:|.:|:::|....:||::.:    |. :.||||
  Fly   741 LLPSRSQLKDSD-FCNETSLMDQGIDCRQEFCKCHHVLQVPLGAVVEMIIVDEGFQYY-ANHPFH 803

  Fly   576 IHGFTFRLVGQGVLGNLNDLRNIQELDRRGRLPRLSEDSAAVAKDTVQIPGQGYIIVRFISNNPG 640
            :||..||::|...||....:..|::||:...|.| :.|:..| ||||.||..||.|:||.::|||
  Fly   804 LHGNAFRVMGLERLGENVTVEMIKQLDQFNLLKR-NLDNPPV-KDTVTIPDGGYTIIRFEASNPG 866

  Fly   641 FWLYHCHVEAHAVQGMVAVLKIGEDHQMKNIP 672
            :||:|||:|.||..||..|.|:|.|.||..:|
  Fly   867 YWLFHCHIEFHAEIGMALVFKVGNDDQMVPVP 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 54/103 (52%)
laccase 151..656 CDD:274556 202/607 (33%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 58/210 (28%)
Mco1NP_609287.3 VWC 150..212 CDD:214564 9/38 (24%)
CuRO_1_tcLCC2_insect_like 293..397 CDD:259927 54/103 (52%)
CuRO_2_tcLCC_insect_like 415..626 CDD:259951 58/210 (28%)
CuRO_3_tcLLC2_insect_like 728..897 CDD:259972 71/172 (41%)

Return to query results.
Submit another query.