DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and F5

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001405980.1 Gene:F5 / 304929 RGDID:1589758 Length:2187 Species:Rattus norvegicus


Alignment Length:647 Identity:123/647 - (19%)
Similarity:205/647 - (31%) Gaps:213/647 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SKSFASLVLIVLLIFASN-----PS-QCESSKDDFPQAKF------------------------- 61
            ||:|..||::.|.....:     || :.||..:|:|:..:                         
  Rat  1468 SKTFNPLVVVGLSRVDGDDVEMIPSEELESIDEDYPEDDYVTYNDPYKTDTRANVNSSRNPDTIA 1532

  Fly    62 EWPSFAWMRNKTTKGTPALDLKNDYSQM---ELANFGDFDRHPCRRVCQQGQSQNCYYQLVVHNY 123
            .|...::..||......|.::..|||:.   |:.| .:.|..|         ....|.::|...|
  Rat  1533 AWYLRSFGGNKKFYYIAAEEISWDYSKFAPSEMDN-EETDNTP---------KDTTYKKVVFRKY 1587

  Fly   124 QRLGPECQRCQFDERACASEHCIYGDGVANPVMAVNRMVPGPSIELCENDTVVVDVLNYLSEPTT 188
            .    :......|.:....||.    |:..||:...           .:|.:.|...|..|.|.:
  Rat  1588 L----DSTFTSRDPQGEYEEHL----GILGPVIRAE-----------VDDVIQVRFKNLASRPYS 1633

  Fly   189 MHWHGVHMHRTPE----MDGAP--FITQYPLQPGEVQRHEF-KVDRSG--------SLW-YHSHV 237
            :|.||:...::.|    .|.:|  |.....:||.....:.: ..:|:|        ..| |:|.|
  Rat  1634 LHAHGLSYEKSSEGKNYEDDSPKWFQEDDAVQPNSSYTYVWHATERAGPENPGSACRAWVYYSAV 1698

  Fly   238 GWQRGF--GVAGAFVVRQTSQENQHSQLYDYDLVEHTLMI------QDIFYEYNLQDVRNILVNG 294
            ..:|..  |:.|..::.:....::.|.| ..|:.|..|:.      :..:||           ..
  Rat  1699 DVERDIHSGLIGPLLICRKGTLDRASNL-PLDMREFVLLFMVFDEKKSWYYE-----------KS 1751

  Fly   295 KGRNHLSQLPDNDNRHRYERLRVTPGYRYRMRVILNG-IANCPVEFSIEQH--RLLMISTDG-ND 355
            ||...: :.|:..|.|.:              ..:|| |.|.|.....||.  ||.:::..| .|
  Rat  1752 KGSWRI-ESPEAKNSHEF--------------YAINGMIYNLPGLRMYEQEWVRLYLLNMGGPQD 1801

  Fly   356 IEPV---------------------LADGFFLTSAERFDFVLEANQYKKNYWIRIKGYEQCENRN 399
            |..|                     |..|.|.|        ||....|..:|:    .:.....|
  Rat  1802 IHVVHFHGQILLDNRTKQHHLGVWPLLPGSFKT--------LEMKASKPGWWL----LDTAVGEN 1854

  Fly   400 IYQGAVLSYRGSARSELPQGDILDKPSSRAADEDLILVNDFRFKPANSTAISSLRQSLDKDNNVG 464
            ...|....:.           |:||............::|.:.|.  |..::.....|.:.||.|
  Rat  1855 QIAGMQTPFL-----------IIDKECKMPMGLSTGAISDSQIKA--SEYLTYWEPRLARLNNGG 1906

  Fly   465 TVALRSVD------PV-PW------------------TRY-------TKFLTHYSSFGSRT---A 494
            :....|::      |: ||                  .:|       |:|...|||  .||   .
  Rat  1907 SYNAWSIEKSALDFPIKPWIQVDMEKEVVVTGIQTQGAKYYLKSCFTTEFQVAYSS--DRTNWQI 1969

  Fly   495 PNGEVLFQISDISYNSPGISLLQGR----------HLYQDDRYFCNKSSLAAEGRNCERELC 546
            ..|..:..:...:.||...::.:.|          .::....|  |:.:|..|...||...|
  Rat  1970 FRGNSMKSVMSFAGNSDASTIKENRFDPPIVARYIRIHPTKSY--NRPTLRLELLGCEVNGC 2029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 26/120 (22%)
laccase 151..656 CDD:274556 93/490 (19%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 32/168 (19%)
F5NP_001405980.1 Cupredoxin 32..195 CDD:473140
Cupredoxin 207..325 CDD:473140
CuRO_3_FV_like 347..526 CDD:259992
Cupredoxin 539..682 CDD:473140
ARG80 <1051..1341 CDD:227400
Cupredoxin 1543..1718 CDD:473140 41/203 (20%)
Cupredoxin 1730..1865 CDD:473140 32/183 (17%)
FA58C 1872..2023 CDD:238014 27/156 (17%)
FA58C 2031..2183 CDD:238014
Blue background indicates that the domain is not in the aligned region.

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