DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mco3 and F8

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_899160.2 Gene:F8 / 302470 RGDID:727845 Length:2258 Species:Rattus norvegicus


Alignment Length:323 Identity:63/323 - (19%)
Similarity:123/323 - (38%) Gaps:69/323 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ESSKDDFPQAKFEWPSFAWMRNKTTKGTPALDLKN-------DYSQMELANFGDFDRHPCRRVCQ 107
            :...:|:.....|...|.|    .....|.:.:::       .:.....|..||:|..|.....:
  Rat   350 DEDTEDYDDLDSEMDVFTW----DPDAAPFVQVRSAAKRHPKTWVHYIAAEEGDWDYAPAAATLE 410

  Fly   108 QGQSQNCYYQLVVHNYQRLGPECQRCQFDERACASEHCIYGDGVANPVMAVNRM--VPGPSIELC 170
            .|..:|.|   :.....|:|.:.::.:|         ..|.||..:...|..|.  :.||.:...
  Rat   411 DGSLRNRY---LGRGPGRIGSKYKKVRF---------VAYTDGTFHTREATPREAGLLGPLLYGE 463

  Fly   171 ENDTVVVDVLNYLSEPTTMHWHG------VHMHRTPEMDGAPFITQYPLQPGEVQRHEFKVD--- 226
            ..|::::...|..|....:|.||      ||..|.|.  |...:...|::|||..::.:.:.   
  Rat   464 VGDSLLIVFKNRASRAYNIHPHGIRDVGAVHAGRLPR--GVKHVKDLPIRPGETFKYRWTLTAED 526

  Fly   227 -------RSGSLWYHSHVGWQRGF--GVAGAFVV--RQTSQENQHSQLYDYDLVEHTLMIQDIFY 280
                   |..:.:|.|.|..:|..  |:.|..::  :::..:..:..:.|    |..:::..:|.
  Rat   527 GPARSDARCVTRYYASAVDPERDLASGLIGPLLICCKESVDQRGNQMMSD----ERNVILFSVFD 587

  Fly   281 E----YNLQDVRNILVNGKGRNHLSQLPDNDNRHRYER---LRVTPGYRY---RMRVILNGIA 333
            |    |..:::|..|.:   ..|: ||.|.:    :|.   :....||.:   .:||.|:.:|
  Rat   588 ENRSWYISENMRRFLPD---EAHV-QLQDPE----FEASNLMHSINGYVFDSLELRVCLHEVA 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 28/124 (23%)
laccase 151..656 CDD:274556 44/215 (20%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 17/74 (23%)
F8NP_899160.2 Cupredoxin 22..199 CDD:473140
Cupredoxin 212..336 CDD:473140
Cupredoxin 387..563 CDD:473140 40/189 (21%)
Cupredoxin 576..718 CDD:473140 18/79 (23%)
FYDLN_acid <1546..1610 CDD:450301
Cupredoxin 1622..1785 CDD:473140
Cupredoxin 1799..1942 CDD:473140
FA58C 1950..2094 CDD:238014
FA58C 2103..2251 CDD:238014
Blue background indicates that the domain is not in the aligned region.

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