DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco3 and Cp

DIOPT Version :10

Sequence 1:NP_651441.1 Gene:Mco3 / 43134 FlyBaseID:FBgn0039387 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001257890.1 Gene:Cp / 24268 RGDID:2387 Length:1084 Species:Rattus norvegicus


Alignment Length:615 Identity:120/615 - (19%)
Similarity:193/615 - (31%) Gaps:205/615 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SFAWMRNK-----TTKGTPALDLKNDYSQMELANFGDFDRHPCRRVCQQGQSQNCYYQLVVHNYQ 124
            |.||.|.|     .|:.  ..|..:...:.||             :....:..|.|.:   :...
  Rat    15 SLAWTREKHYYIGITEA--VWDYASGSEEKEL-------------ISVDTEQSNFYLR---NGPD 61

  Fly   125 RLGPECQRCQFDERACASEHCIYGDGVANPVMAVNRMVP--GPSIELCENDTVVVDVLNYLSEPT 187
            |:|.:.::..:.|         |.||.....:.....:.  ||.|:....|.|.|.|.|:.|.|.
  Rat    62 RIGRKYKKALYSE---------YTDGTFTKTIDKPAWLGLLGPVIKAEVGDKVSVHVKNFASRPY 117

  Fly   188 TMHWHGVHMHRTPEMDGAPFITQYP------------LQPGEVQRHEFKVDRSG---------SL 231
            |.|.|||..  |...:||    .||            |.||:...:..:.:...         :.
  Rat   118 TFHAHGVTY--TKANEGA----IYPDNTTDFQRADDKLFPGQQYLYVLRANEPSPGEGDSNCVTR 176

  Fly   232 WYHSHVGWQRGF--GVAGAFVV-RQTSQENQHSQLYDYDLVEHTLM--IQDIFYEYNLQDVRNIL 291
            .|||||...:..  |:.|..:: ::.|...:..:..|.:.|   ||  :.|....:.|:|  ||.
  Rat   177 IYHSHVDAPKDIASGLIGPLILCKKGSLHKEKEENIDQEFV---LMFSVVDENLSWYLED--NIK 236

  Fly   292 VNGKGRNHLSQLPDNDNRHRYERLRVTPGYRYRMRVILNGIANCPVEFSIEQHRLLMISTDGN-- 354
            ........:.:  ||::.....|:....||.:..   |.|::.| .|..::.:...|    ||  
  Rat   237 TFCSEPEKVDK--DNEDFQESNRMYSINGYTFGS---LPGLSMC-AEDRVKWYLFGM----GNEV 291

  Fly   355 DIEPVLADGFFLTSAE-RFDFV-------LEANQYKKN--YWIRIKGYEQCENRNIYQGAVLSY- 408
            |:...|..|..|||.. ..|.:       ::.:...:|  .|:.     .|:|.|..:..:.:: 
  Rat   292 DVHSALFHGQALTSKNYHTDIINLFPATLIDVSMVAQNPGVWML-----SCQNLNHLKAGLQAFF 351

  Fly   409 -RGSARSELPQGDILDKPSSR---AADE---DLILVNDFRFKPANSTAISS-------------- 452
             ........|..||.|:....   ||:|   |........|...|.|::.|              
  Rat   352 QVRDCNKPSPDDDIQDRHVRHYYIAAEETIWDYAPSGTDTFTGENLTSLGSDSRVFFEQGATRIG 416

  Fly   453 -------LRQSLD------KDNNVGTVALRSVDPVPW-------------------------TRY 479
                   .|:..|      |........|..:.||.|                         .|:
  Rat   417 GSYKKLVYREYTDDSFTNRKQRGPDEEHLGILGPVIWAEVGDIIRVTFHNKGQFPLSIQPMGVRF 481

  Fly   480 TKFLTHYSSFGSRTAPNGEVLFQISDI------------------SYNSP---------GISLLQ 517
            ||     .:.|:...|:|....|.|.:                  :|..|         |:.|.:
  Rat   482 TK-----ENEGTYYGPDGRSSKQASHVAPKETFTYEWTVPKEMGPTYADPVCLSKMYYSGVDLTK 541

  Fly   518 GRHLYQDDRY--------FCNKSSLAAEGR 539
                   |.:        .|.|.||.|:||
  Rat   542 -------DIFTGLIGPMKICKKGSLLADGR 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco3NP_651441.1 CuRO_1_tcLCC2_insect_like 149..252 CDD:259927 32/128 (25%)
laccase 151..656 CDD:274556 103/524 (20%)
CuRO_2_tcLCC_insect_like 270..408 CDD:259951 31/151 (21%)
CpNP_001257890.1 Cupredoxin 22..201 CDD:473140 43/211 (20%)
CuRO_2_ceruloplasmin 213..353 CDD:259907 33/159 (21%)
Cupredoxin 369..566 CDD:473140 35/208 (17%)
CuRO_4_ceruloplasmin 569..712 CDD:259908
CuRO_5_ceruloplasmin 726..896 CDD:259887
CuRO_6_ceruloplasmin 907..1051 CDD:259898
Blue background indicates that the domain is not in the aligned region.

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