DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodq and sod1

DIOPT Version :10

Sequence 1:NP_651440.1 Gene:Sodq / 43133 FlyBaseID:FBgn0039386 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001016252.1 Gene:sod1 / 549006 XenbaseID:XB-GENE-1006488 Length:151 Species:Xenopus tropicalis


Alignment Length:162 Identity:52/162 - (32%)
Similarity:71/162 - (43%) Gaps:35/162 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LMGDGEGAGVAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGGQF----- 158
            |.|.|:   |.|::.|.|.. ...:.|...:.||..|||..|||.|||.::||.|.|..|     
 Frog     8 LAGSGD---VKGVVHFQQQD-EGPVTVEGKIYGLTDGKHGFHIHEFGDNTNGCISAGPHFNPESK 68

  Fly   159 ----PNNF------LGNVDTKDDGSISAVFQSIYLQLFGINGIVGRSIVIHSKAIDLNTALNAEV 213
                |.:.      ||||..||..:...:..|: :.|.|.:.|:||..|:|.|..||....|.| 
 Frog    69 THGAPEDAVRHVGDLGNVTAKDGVAEFKLTDSL-ISLKGNHSIIGRCAVVHEKEDDLGKGGNDE- 131

  Fly   214 FSSSLQAMPNPLAYQNEENSLGPAIACGVISI 245
               ||:.           .:.|..:|||||.:
 Frog   132 ---SLKT-----------GNAGGRLACGVIGL 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SodqNP_651440.1 Sod_Cu 108..243 CDD:459663 47/149 (32%)
sod1NP_001016252.1 Sod_Cu 14..147 CDD:459663 47/149 (32%)

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