powered by:
Protein Alignment CG5948 and Sod3
DIOPT Version :9
Sequence 1: | NP_651440.1 |
Gene: | CG5948 / 43133 |
FlyBaseID: | FBgn0039386 |
Length: | 270 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001033939.2 |
Gene: | Sod3 / 36232 |
FlyBaseID: | FBgn0033631 |
Length: | 243 |
Species: | Drosophila melanogaster |
Alignment Length: | 187 |
Identity: | 55/187 - (29%) |
Similarity: | 80/187 - (42%) |
Gaps: | 39/187 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 94 QAGAKLMG--DGEGAGVAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGG 156
||.|.|:| ..:...|.|.::|.|.....::.|.:.:.||..|||..|||..|||::||.|.|.
Fly 27 QAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRVQLEGLKEGKHGFHIHEKGDLTNGCISMGA 91
Fly 157 QF-PNNF--------------LGNVDTKDDGSISAVFQSIYLQLFGINGIVGRSIVIHSKAIDLN 206
.: |:.. |||::....|.|...:....:.|.|..||:||.:|:|....||.
Fly 92 HYNPDKVDHGGPDHEVRHVGDLGNLEANSTGIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLG 156
Fly 207 TALNAEVFSSSLQAMPNPLAYQNEENSLGPAIACGVISIMSTAASSSGMATAAPAPP 263
...:.: ..:..:.|..||||||.| :|.:..|||||
Fly 157 LGNHTD---------------SKKTGNAGGRIACGVIGI-------NGPSVPAPAPP 191
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5948 | NP_651440.1 |
Sod_Cu |
108..243 |
CDD:278508 |
41/149 (28%) |
Sod3 | NP_001033939.2 |
Sod_Cu |
42..178 |
CDD:278508 |
41/150 (27%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2032 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S341 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1574423at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR10003 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.870 |
|
Return to query results.
Submit another query.