DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodq and sod-5

DIOPT Version :10

Sequence 1:NP_651440.1 Gene:Sodq / 43133 FlyBaseID:FBgn0039386 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_494779.1 Gene:sod-5 / 173776 WormBaseID:WBGene00007036 Length:178 Species:Caenorhabditis elegans


Alignment Length:172 Identity:52/172 - (30%)
Similarity:68/172 - (39%) Gaps:39/172 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 GAGVAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGGQF-PNNF------ 162
            |..|.|.:...|.....:......:.||.||.|..|||.:||.:|||.|.|..| |...      
 Worm    31 GTAVFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPHFNPCKMNHGGRD 95

  Fly   163 --------LGNVDTKDDGSISAVFQSIYLQLFGINGIVGRSIVIHSKAIDLNTALNAEVFSSSLQ 219
                    ||||:...||.....|....:.|||.|.::|||:|:|....||...::.:. ..||:
 Worm    96 SVVRHVGDLGNVEAGADGVAKIKFSDKVVSLFGANTVIGRSMVVHVDRDDLGQGIDDKA-EESLK 159

  Fly   220 AMPNPLAYQNEENSLGPAIACGVISIMSTAASSSGMATAAPA 261
            .           .:.|...|||||            |.||||
 Worm   160 T-----------GNAGARAACGVI------------ALAAPA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SodqNP_651440.1 Sod_Cu 108..243 CDD:459663 44/149 (30%)
sod-5NP_494779.1 Sod_Cu 34..172 CDD:459663 44/149 (30%)

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