DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5913 and Fam98b

DIOPT Version :10

Sequence 1:NP_651439.2 Gene:CG5913 / 43132 FlyBaseID:FBgn0039385 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001388874.1 Gene:Fam98b / 499866 RGDID:1564603 Length:434 Species:Rattus norvegicus


Alignment Length:466 Identity:176/466 - (37%)
Similarity:252/466 - (54%) Gaps:72/466 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVDSLKALSFQGHCQKQENLSRALDAGIESPDMQEVVLWLAHELHILRKTDERV-NQGKALNKDF 71
            ::|:|:||.::|...:::.||:|.:.|:.||:..|:.:||..::..|...:|.: :.|:...:.|
  Rat    16 VLDTLEALGYKGPLLEEQALSKAAEGGLSSPEFSELCIWLGSQIKSLCNLEESITSAGRDDLEGF 80

  Fly    72 SFELSLLLTELGCPYRELVQGPIEQRFKSRMALVQLLEYLTSELMTTKMVLKAQPVGPPCKRSKV 136
            ..|:|..|.|:.|||..||.|.|::|..::...::||.:|::||...:::.|.:.     |.|::
  Rat    81 QLEISGFLKEMACPYSVLVSGDIKERLTTKDDCLKLLLFLSTELQALQILQKKKH-----KNSQL 140

  Fly   137 DTN------VQQVVENLAKDLQLGEVPKN--INTKMLFEKITPRLEQAIKKTNPQVLSEPLLKLK 193
            |.|      ||.:.:.|.       |||:  .:..:|...:..:::..:.|.....:.:||||: 
  Rat   141 DKNSEICQEVQAICDALG-------VPKSDTSDIPLLLSHVESKVKDILSKVQKSHVGKPLLKV- 197

  Fly   194 KPLTDAQWQLLETLHRELEAEYNLRRQMMSTRLEATVQSFQWSESMRQRSNEIMDRFNRKMRELD 258
             .||..|.:.||.::..|..||..||:|:..||:.|||||.||:..:.:::.|...:..|     
  Rat   198 -DLTSEQAEKLERINDALSCEYECRRRMLMKRLDVTVQSFGWSDRAKAKTDNIARIYQPK----- 256

  Fly   259 QFKVGGKQT-DLVALLAARSDLAIIEKTSSANVRKNTASKIQKHVIGRVPDRGGRANEHAPPPPE 322
            ::.:..|.| .|..|||||.||:.|.:|||...|:.||..|.|.::|||||||||.||..|||||
  Rat   257 RYALSPKTTVTLAHLLAAREDLSKIIRTSSGISREKTACAINKVLMGRVPDRGGRPNEIEPPPPE 321

  Fly   323 MPSWQQQRAS------GPPGGGRGGGGNFRGGRGGGGGGGFGGGRGGGGGGGGGNWQQPQQQQQQ 381
            ||.||:::..      |..||||||||..||| .||||||:|||.|||||||||.|         
  Rat   322 MPPWQKRQEGGGRGGWGGGGGGRGGGGGGRGG-WGGGGGGWGGGGGGGGGGGGGGW--------- 376

  Fly   382 HQNQSYEQRDRSDRNDQQWISGSGRVQGTGWNPQGGRDGGGR-DGGGRDG-GGRDG-GGRG---- 439
                                .|||...|.....||..|.||| |.|||.| |||.| ||||    
  Rat   377 --------------------GGSGGGGGGRGGFQGRGDYGGRGDYGGRGGYGGRGGYGGRGYGDP 421

  Fly   440 RGGGGGRGGYR 450
            .|||||.||||
  Rat   422 YGGGGGGGGYR 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5913NP_651439.2 DUF2465 26..331 CDD:463016 108/314 (34%)
Fam98bNP_001388874.1 DUF2465 34..330 CDD:463016 108/314 (34%)

Return to query results.
Submit another query.