DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and AT5G17470

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_197249.1 Gene:AT5G17470 / 831613 AraportID:AT5G17470 Length:146 Species:Arabidopsis thaliana


Alignment Length:136 Identity:32/136 - (23%)
Similarity:60/136 - (44%) Gaps:22/136 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSVYER---- 116
            :|.:..|.|.:....|.|...|....: :|:..||:.:..|   |:....|.|:.|....:    
plant    15 DGKISWDEFAEAIRAFSPSITSEEIDN-MFREIDVDGDNQI---DVAEYASCLMLGGEGNKEDED 75

  Fly   117 --LRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQPEDDRKARDQVDRVFRKLDLNQDGI 179
              ::..|.|||::|||:||..|:..::..:.|            ::...:...:.|.:|.:.||.
plant    76 IVMKEAFDLYDIDGDGKISASEIHVVLKRLGE------------KQTIAECIAMVRAVDADGDGF 128

  Fly   180 ITIEEF 185
            ::.|||
plant   129 VSFEEF 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 32/136 (24%)
AT5G17470NP_197249.1 EF-hand_7 5..60 CDD:290234 11/48 (23%)
EFh 5..58 CDD:238008 11/46 (24%)
EF-hand_7 78..138 CDD:290234 18/69 (26%)
EFh 79..139 CDD:238008 18/68 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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