DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5890 and CBL3

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001320073.1 Gene:CBL3 / 828764 AraportID:AT4G26570 Length:230 Species:Arabidopsis thaliana


Alignment Length:181 Identity:47/181 - (25%)
Similarity:83/181 - (45%) Gaps:15/181 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EDLCRQTKFTKQEIRVMYRGFK----TECPEGVVHEDCFKDIYAKFFPHGNSSLYA----HYVFK 86
            |.|.|:|.|:..||..:|..||    ....:|:::::.|:  .|.|..:...||:|    ..||.
plant    34 ELLARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQ--LALFKTNKKESLFADRYQSQVFD 96

  Fly    87 AFDVNCNGAISFRDLLVTLSTL-LRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGR 150
            .||...||.:.|.:....||.. ....:.:::.::|:||||...|.|.|.|:.::::|.....|.
plant    97 LFDTKHNGILGFEEFARALSVFHPNAPIEDKIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGM 161

  Fly   151 RPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQM 201
            .    ..|......:|:.|.:.|...||.|..||:....|:...:.:::.:
plant   162 N----LSDEIIESIIDKTFEEADTKHDGRIDKEEWRTLVLRHPSLLKNMTL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 47/170 (28%)
CBL3NP_001320073.1 EFh_PEF 40..202 CDD:330173 44/167 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 86 1.000 Inparanoid score I2330
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1040
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.960

Return to query results.
Submit another query.