DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and AT3G03400

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_186990.1 Gene:AT3G03400 / 821266 AraportID:AT3G03400 Length:137 Species:Arabidopsis thaliana


Alignment Length:102 Identity:27/102 - (26%)
Similarity:40/102 - (39%) Gaps:39/102 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VFKAFDVNCNGAIS---FRDLLVTLSTLL------------------------------------ 109
            :|:.||.:.:|.||   |||.:..||..:                                    
plant     9 IFERFDTSKDGKISWEEFRDAIHALSPSIPSEKLVEMFIQLDTNGDGQVDAAKFASCMDQTAQSS 73

  Fly   110 RGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHE 146
            .|.|.:.|:..|||||:|.||:||..||..::..:.|
plant    74 GGDVEKELKDAFKLYDINCDGKISANELHVVMTRLGE 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 27/102 (26%)
AT3G03400NP_186990.1 PTZ00184 10..134 CDD:185504 27/101 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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