DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and rcvrnb

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001304684.1 Gene:rcvrnb / 792903 ZFINID:ZDB-GENE-120815-1 Length:203 Species:Danio rerio


Alignment Length:184 Identity:54/184 - (29%)
Similarity:103/184 - (55%) Gaps:3/184 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCN 93
            |::|...|.::::::...|:.|..|||.|.:..:.|:.|||.|||..:...||.:||::||.:.:
Zfish    14 LQELQTSTTYSQEQLFSWYQKFLNECPTGRISREQFQSIYASFFPDADPGAYAQHVFRSFDADSD 78

  Fly    94 GAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQ--PE 156
            |.:.|::.:|.|.....|...|:|.|.|.|||::.:|.|::.|:.||:.:|..::.:...:  |:
Zfish    79 GTLDFKEYIVALHLTSSGKTVEKLEWAFALYDVDRNGSITKNEIHEIVKSIFNMISKEDQKNLPD 143

  Fly   157 DDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQMFDNDLXXQE 210
            |:.....:.|:::......::|.||..||::..:.:..:.|.:| ||...  ||
Zfish   144 DENTPEKRTDKIWDFFGKKENGKITEGEFIQGVMDNKHILRLIQ-FDKPQKVQE 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 32/109 (29%)
rcvrnbNP_001304684.1 FRQ1 42..178 CDD:444056 40/135 (30%)
EFh 65..127 CDD:238008 23/61 (38%)

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