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Protein Alignment CG5890 and Cib3
DIOPT Version :9
Sequence 1: | NP_001356889.1 |
Gene: | CG5890 / 43126 |
FlyBaseID: | FBgn0039380 |
Length: | 229 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001178010.1 |
Gene: | Cib3 / 685723 |
RGDID: | 1590245 |
Length: | 187 |
Species: | Rattus norvegicus |
Alignment Length: | 192 |
Identity: | 41/192 - (21%) |
Similarity: | 76/192 - (39%) |
Gaps: | 58/192 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 LEDLCRQTKFTKQEI-RVMYRGFK-----------TECPEGVVHEDCFKDIYAKFFPHGNSSLYA 81
||:....|.||::|| |:.|| :: |..||..|..:....: |....:.:.
Rat 13 LEEYQDCTFFTRKEIMRLFYR-YQDLAPQLVPLDYTTSPEVKVPYELIGSM-----PELKDNPFR 71
Fly 82 HYVFKAFDVNCNGAI---SFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDG------------R 131
..:.:.|..:.:|.: :|.|:...:|.:....: :..:.||:||.|.|. |
Rat 72 QRIAQVFSQDGDGHMTLENFLDMFSVMSEMAPRDL--KAYYAFKIYDFNNDNYICTWDLEQTVTR 134
Fly 132 ISRGELS--EIILAIHELMGRRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLK 191
::||||| |:.|. .::|..:.|.:.||.:::|:|....|:
Rat 135 LTRGELSVEEVTLV---------------------CEKVLDEADSDHDGRLSLEDFQNMILR 175
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5890 | NP_001356889.1 |
FRQ1 |
29..192 |
CDD:227455 |
41/192 (21%) |
Cib3 | NP_001178010.1 |
FRQ1 |
6..178 |
CDD:227455 |
41/192 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X31 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.000 |
|
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