DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and Efcab1

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_006522537.1 Gene:Efcab1 / 66793 MGIID:1914043 Length:244 Species:Mus musculus


Alignment Length:186 Identity:50/186 - (26%)
Similarity:94/186 - (50%) Gaps:21/186 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KPIPVALEDLCRQTK-FTKQEIRVMYR------GFKTECPEGVV---HEDCFKDIYAKFFPHGNS 77
            |.:....:.|.:..| |.|.|::.:..      |...|.| |||   ..:.|::|....|.. ..
Mouse     4 KKLQKLTDTLTKNCKHFDKFEVKCLITLFYNLVGDVAERP-GVVTGLDRNVFRNILHVTFGM-TD 66

  Fly    78 SLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIIL 142
            .:....||:.||.:.:|.||..:.:..||..|||::.|::::.|:::||||||.||:.|:     
Mouse    67 DMIMDRVFRGFDKDNDGCISVSEWIHGLSLFLRGTLDEKMKYCFEVFDLNGDGFISKEEM----- 126

  Fly   143 AIHELMG---RRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLV 195
             .|.|..   ::|.:.:.|...:|.|:...:|:|.:.||.::..::.:|..:::|:
Mouse   127 -FHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFVDYEKAVREENLL 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 48/175 (27%)
Efcab1XP_006522537.1 FRQ1 <49..175 CDD:227455 36/132 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833442
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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