DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and cib1

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001017681.1 Gene:cib1 / 550376 ZFINID:ZDB-GENE-050417-170 Length:188 Species:Danio rerio


Alignment Length:189 Identity:40/189 - (21%)
Similarity:86/189 - (45%) Gaps:26/189 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TRVPKPIPVALEDLCRQTKFTKQEIRVMYRGF-KTECPEGVVHEDCFKDIYAKFFPHGNSSLYAH 82
            :::||.:....::|   |..|||||.:.::.| :.:..|...:............|...|:.:..
Zfish     6 SKLPKELLSEYQEL---TFLTKQEILLAHKRFSELQGRENGPYSSRVSMEKILTLPELKSNPFRK 67

  Fly    83 ---YVFKAFDVNCNGAISFRDLLVTLSTLLRGSVYE-RLRWTFKLYDLNGDGRISRGELSEIILA 143
               :||...|:. :|:::|.|.|..||.....:..| :..:.|:::|.:.||.:...:|.::   
Zfish    68 RICHVFSTSDLR-DGSLTFEDFLDLLSAFSDSATLEIKSHYAFRIFDFDDDGTLDGRDLEKL--- 128

  Fly   144 IHELMGRRPHQPEDDR----KARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRS 198
            ::.|.|    :.:|.|    :.|..:..:..:.|:::||.:...||      ..:::||
Zfish   129 VNCLTG----ETDDTRLTAEEMRQLISNILEESDIDKDGTVNPSEF------QHVISRS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 36/171 (21%)
cib1NP_001017681.1 FRQ1 4..179 CDD:227455 40/189 (21%)
EFh 108..175 CDD:238008 15/79 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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