DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and malsu1

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001016140.1 Gene:malsu1 / 548894 XenbaseID:XB-GENE-1000345 Length:243 Species:Xenopus tropicalis


Alignment Length:117 Identity:26/117 - (22%)
Similarity:41/117 - (35%) Gaps:23/117 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EDLC-----RQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFD 89
            :|||     .|.|:|  :..|:..||.|.      |.........|.:.:.......|...:..|
 Frog   116 KDLCVIRVPPQLKYT--DYFVVVSGFSTR------HVQAMAQYSVKVYKYLKREDEPHVQIEGED 172

  Fly    90 VNCNGAISFRDLLVTLSTLLRGSVYERLR-WTFKLYDLNGDGRISRGELSEI 140
            .:....|.|.:::|..........||..: ||.:.||         .:||:|
 Frog   173 TDDWMCIDFGNIVVHFMLPETREKYELEKLWTLRSYD---------DQLSQI 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 26/117 (22%)
malsu1NP_001016140.1 RsfS 104..203 CDD:376779 19/94 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165162850
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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