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Protein Alignment CG5890 and Hpcal4
DIOPT Version :9
Sequence 1: | NP_001356889.1 |
Gene: | CG5890 / 43126 |
FlyBaseID: | FBgn0039380 |
Length: | 229 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_059053.1 |
Gene: | Hpcal4 / 50872 |
RGDID: | 708491 |
Length: | 191 |
Species: | Rattus norvegicus |
Alignment Length: | 182 |
Identity: | 76/182 - (41%) |
Similarity: | 121/182 - (66%) |
Gaps: | 6/182 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 KPIPVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKA 87
|..|..||||.:.|:|::||::..|:||..:||.|:::.:.|:.:|.||||:|::|.:|.:.|:.
Rat 7 KLAPEELEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGDASKFAQHAFRT 71
Fly 88 FDVNCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMG--- 149
||.|.:|.|.||:.:..||...|||..::|.|.|::|||:|||||:|.|:.|||.||::::|
Rat 72 FDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLEMLEIIEAIYKMVGTVI 136
Fly 150 -RRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQ 200
.|.:| |....:.:||::|:|:|.::|..||:|||.||...|..:...||
Rat 137 MMRMNQ--DGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPSIVLLLQ 186
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5890 | NP_001356889.1 |
FRQ1 |
29..192 |
CDD:227455 |
71/166 (43%) |
Hpcal4 | NP_059053.1 |
FRQ1 |
13..181 |
CDD:227455 |
72/169 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166337003 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000038 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X31 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.840 |
|
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