DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and cib3

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001011260.1 Gene:cib3 / 496710 XenbaseID:XB-GENE-5787572 Length:207 Species:Xenopus tropicalis


Alignment Length:205 Identity:45/205 - (21%)
Similarity:88/205 - (42%) Gaps:36/205 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TKFTKQEIRVMYRGFKTECPEGVVHEDCFK-DIYAKF-----FPHGNSSLYAHYVFKAFDVNCNG 94
            |.||::||..::..::...|:.|..:...| |:...:     .|....:.:...:.:.|..:.:|
 Frog    20 TFFTRKEILRLFNRYRDLAPQLVPDDYTNKPDVKIPYELIGSMPELKDNPFRQRIAEVFSEDGDG 84

  Fly    95 AISFRDLLVTLSTLLRGSVYE-RLRWTFKLYDLNGDGRISRGELSEII--LAIHELMGRRPHQPE 156
            .::..|.|...|.|...:..: :..:.||:||.|.|..|.:.:|.:.:  |..:||      .||
 Frog    85 NMTLDDFLDMFSVLSEMAPKDLKAFYAFKIYDFNNDDYICKSDLEKTLNKLTRNEL------TPE 143

  Fly   157 DDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLK-------DDLVTRSLQMFDNDLXXQEGELE 214
            :....   .::|..:.|::.||.:::|:|....::       |..|.|..|:          :.|
 Frog   144 EVCLV---CEKVIDEADVDNDGKLSLEDFQHMIVRAPDFLRVDWQVPRREQL----------KKE 195

  Fly   215 PGLRNSRTII 224
            | |:|..|.|
 Frog   196 P-LKNMYTFI 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 35/171 (20%)
cib3NP_001011260.1 FRQ1 20..178 CDD:227455 35/166 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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