DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and rcvrn.2

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001008164.1 Gene:rcvrn.2 / 493526 XenbaseID:XB-GENE-5807318 Length:193 Species:Xenopus tropicalis


Alignment Length:179 Identity:54/179 - (30%)
Similarity:94/179 - (52%) Gaps:12/179 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCN 93
            ||||...|:::..|:...|..|..:.|.|.:....|:.|||.|||:.:...||.:||::||.|.:
 Frog    14 LEDLKANTRYSDDELCKWYESFSKQSPNGKITRTEFEKIYANFFPNSDPKSYARHVFRSFDTNED 78

  Fly    94 GAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQPEDD 158
            |.:.||:.::.|.....|....:|.|.|.|:|::.:|.||:.|:.|||.||.:::     .||:.
 Frog    79 GTLDFREYIIALHLTSSGKTSLKLEWAFSLFDVDKNGEISKVEVLEIITAIFKMI-----PPEEQ 138

  Fly   159 RKARD-------QVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQ 200
            :...|       :.|:::.....:.|..|...||::..:.:|.:.|.:|
 Frog   139 KNLADDENTPQKRADKLWAYFKKSDDAKIAEGEFIQGIMMNDEIMRLIQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 51/169 (30%)
rcvrn.2NP_001008164.1 FRQ1 14..177 CDD:227455 51/167 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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