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Protein Alignment CG5890 and rcvrn.2
DIOPT Version :9
Sequence 1: | NP_001356889.1 |
Gene: | CG5890 / 43126 |
FlyBaseID: | FBgn0039380 |
Length: | 229 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001008164.1 |
Gene: | rcvrn.2 / 493526 |
XenbaseID: | XB-GENE-5807318 |
Length: | 193 |
Species: | Xenopus tropicalis |
Alignment Length: | 179 |
Identity: | 54/179 - (30%) |
Similarity: | 94/179 - (52%) |
Gaps: | 12/179 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 LEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCN 93
||||...|:::..|:...|..|..:.|.|.:....|:.|||.|||:.:...||.:||::||.|.:
Frog 14 LEDLKANTRYSDDELCKWYESFSKQSPNGKITRTEFEKIYANFFPNSDPKSYARHVFRSFDTNED 78
Fly 94 GAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQPEDD 158
|.:.||:.::.|.....|....:|.|.|.|:|::.:|.||:.|:.|||.||.::: .||:.
Frog 79 GTLDFREYIIALHLTSSGKTSLKLEWAFSLFDVDKNGEISKVEVLEIITAIFKMI-----PPEEQ 138
Fly 159 RKARD-------QVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQ 200
:...| :.|:::.....:.|..|...||::..:.:|.:.|.:|
Frog 139 KNLADDENTPQKRADKLWAYFKKSDDAKIAEGEFIQGIMMNDEIMRLIQ 187
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5890 | NP_001356889.1 |
FRQ1 |
29..192 |
CDD:227455 |
51/169 (30%) |
rcvrn.2 | NP_001008164.1 |
FRQ1 |
14..177 |
CDD:227455 |
51/167 (31%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000038 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X31 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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