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Protein Alignment CG5890 and chp1
DIOPT Version :9
Sequence 1: | NP_001356889.1 |
Gene: | CG5890 / 43126 |
FlyBaseID: | FBgn0039380 |
Length: | 229 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001004859.1 |
Gene: | chp1 / 448152 |
XenbaseID: | XB-GENE-1007598 |
Length: | 193 |
Species: | Xenopus tropicalis |
Alignment Length: | 182 |
Identity: | 41/182 - (22%) |
Similarity: | 77/182 - (42%) |
Gaps: | 28/182 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 LEDLCRQTKFTKQEIRVMYRGFKT--ECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVN 91
:|::.::|.|:..:|..:|..|.: :...|.:..:.|:.| |....:.....:..||...
Frog 14 IEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRI-----PELAINPLGDRIINAFFTE 73
Fly 92 CNGAISFRDLLVTL--------------STLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIIL 142
....::||..:.|| |.....|...:|.:.|:||||:.|.:|||.||.::
Frog 74 GEDQVNFRGFMRTLAHFRPIEDNSKDANSQEPLNSRSNKLLFAFRLYDLDKDDKISREELLQV-- 136
Fly 143 AIHELMGRRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDL 194
:..::|.. ..|.:.....||..::.|.:.|..|:..||::...|.|:
Frog 137 -LRMMVGVN----ISDDQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDV 183
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5890 | NP_001356889.1 |
FRQ1 |
29..192 |
CDD:227455 |
39/178 (22%) |
chp1 | NP_001004859.1 |
FRQ1 |
1..180 |
CDD:227455 |
39/177 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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