DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and ncs1a

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001315441.1 Gene:ncs1a / 393437 ZFINID:ZDB-GENE-021220-1 Length:190 Species:Danio rerio


Alignment Length:178 Identity:72/178 - (40%)
Similarity:115/178 - (64%) Gaps:0/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDV 90
            |..:|||||:|.||::|::..|:||..:||.|.:....|:.||.:|||.|:.:.:|.:||..||.
Zfish    10 PEVVEDLCRKTYFTEKEVQQWYKGFIKDCPSGQLDSSGFQKIYKQFFPFGDPTKFATFVFNVFDE 74

  Fly    91 NCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQP 155
            |.:|.|.|.:.:..||...||::.|:|||.||||||:.||.|:|.|:..|:.||::::|.....|
Zfish    75 NKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRDEMLNIVDAIYQMVGNTVELP 139

  Fly   156 EDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQMFD 203
            |::.....:|||:|..:|.|.||::|::||.|....|..:.::|.::|
Zfish   140 EEENTPEKRVDRIFAMMDKNADGMLTLQEFQEGSKADPSIVQALSLYD 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 68/162 (42%)
ncs1aNP_001315441.1 FRQ1 15..179 CDD:227455 68/163 (42%)
EFh 65..125 CDD:238008 28/59 (47%)
EFh 100..172 CDD:238008 31/71 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576103
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

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