DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and rcvrn2

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_956258.1 Gene:rcvrn2 / 335650 ZFINID:ZDB-GENE-030131-7590 Length:193 Species:Danio rerio


Alignment Length:167 Identity:50/167 - (29%)
Similarity:96/167 - (57%) Gaps:2/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCN 93
            ||||...|||::.|:...|..|:.:||.|.:..:.||.||.:|||..:::.||.:||::||.|.:
Zfish    14 LEDLKLNTKFSENELSQWYENFQKQCPSGRITPEEFKKIYERFFPECDTTSYAQHVFRSFDTNDD 78

  Fly    94 GAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQ--PE 156
            |.:.|::.::.|.....|....:|.|.|.|:|::.:|.|::.|::||..||.:|:.:...:  |.
Zfish    79 GTLDFKEYIIALHMTSTGKTERKLEWAFSLFDVDKNGYITKSEVAEICQAIFKLIPKEDQESLPA 143

  Fly   157 DDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDD 193
            |:.....:.|:::...:...:..:...||::..|:::
Zfish   144 DENTPEKRADKLWSYFNKKDNERLAEGEFIQGILENE 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 29/109 (27%)
rcvrn2NP_956258.1 FRQ1 41..176 CDD:444056 37/134 (28%)
EFh 65..125 CDD:238008 19/59 (32%)

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