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Protein Alignment CG5890 and Guca1b
DIOPT Version :9
Sequence 1: | NP_001356889.1 |
Gene: | CG5890 / 43126 |
FlyBaseID: | FBgn0039380 |
Length: | 229 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001101668.1 |
Gene: | Guca1b / 316218 |
RGDID: | 1308191 |
Length: | 201 |
Species: | Rattus norvegicus |
Alignment Length: | 187 |
Identity: | 62/187 - (33%) |
Similarity: | 103/187 - (55%) |
Gaps: | 30/187 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 EIRVMYRGFKTECPEGV--VHEDCFKDIYAKFFP-HGN--SSLYAHYVFKAFDVNCNGAISFRDL 101
|::..|:.|..|||.|. :|| :.:||. .|| ::.|...:|:|||.|.:..|.|.:.
Rat 20 ELQEWYKKFVVECPSGTLFMHE------FKRFFKVTGNEEATQYVEGMFRAFDKNGDNTIDFLEY 78
Fly 102 LVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQPEDDRKARDQ-- 164
:..|:.:|||::..:|:||||:||.:.:|.|.|.||.:|:.||::| ::..:.|.|.:.:.|
Rat 79 VAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRLELLDIVEAIYKL--KKACRAELDLEQQGQLL 141
Fly 165 -----VDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQMFDNDLXXQEGELEPG 216
|||:|..:|.|.||.:::.||:|...:|..|.:.||| ::.||
Rat 142 TPEEVVDRIFLLVDENGDGQLSLTEFIEGARRDKWVMKMLQM----------DVNPG 188
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5890 | NP_001356889.1 |
FRQ1 |
29..192 |
CDD:227455 |
55/161 (34%) |
Guca1b | NP_001101668.1 |
FRQ1 |
15..175 |
CDD:227455 |
55/162 (34%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166337000 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000038 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X31 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.840 |
|
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