Protein Alignment CG5890 and Hpca

DIOPT Version :10

• Sequence 1: NP_001356889.1
• Gene: CG5890 / 43126
• FlyBaseID: FBgn0039380
• Length: 229
• Species: Drosophila melanogaster
• Sequence 2: NP_058818.1
• Gene: Hpca / 29177
• RGDID: 620060
• Length: 193
• Species: Rattus norvegicus
• Alignment Length: 175
• Identity: 70/175 - (40%)
• Similarity: 115/175 - (65%)
• Gaps: 0/175 - (0%)

  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDV 90
            |..|:||...|:|::.|::..|:||..:||.|:::.|.||.|||.|||:|::|.:|.:||:.||.
  Rat    10 PEMLQDLRENTEFSELELQEWYKGFLKDCPTGILNVDEFKKIYANFFPYGDASKFAEHVFRTFDT 74

  Fly    91 NCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQP 155
            |.:|.|.||:.::.||...||.:.::|.|.|.:|||:|:|.|||.|:.||:.||::::......|
  Rat    75 NSDGTIDFREFIIALSVTSRGRLEQKLMWAFSMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMP 139

  Fly   156 EDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQ 200
            ||:.....:.:::||::|.|.||.:::|||:.....|..:.|.||
  Rat   140 EDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPSIVRLLQ 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5890	NP_001356889.1	FRQ1	<80..188	CDD:444056	42/107 (39%)
Hpca	NP_058818.1	FRQ1	41..175	CDD:444056	54/133 (41%)