DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5890 and Cib3

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_006509731.1 Gene:Cib3 / 234421 MGIID:2685953 Length:187 Species:Mus musculus


Alignment Length:188 Identity:42/188 - (22%)
Similarity:77/188 - (40%) Gaps:50/188 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LEDLCRQTKFTKQEI-RVMYRGFKTECPEGVVHEDCFKDIYAKF-------FPHGNSSLYAHYVF 85
            ||:....|.||::|| |:.|| ::...|: :|..|.......|.       .|....:.:...:.
Mouse    13 LEEYQDCTFFTRKEIMRLFYR-YQDLAPQ-LVPLDYTTSPKVKVPYELIGSMPELKDNPFRQRIA 75

  Fly    86 KAFDVNCNGAI---SFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDG------------RISRG 135
            :.|..:.:|.:   :|.|:...:|.:....:  :..:.||:||.|.|.            |::||
Mouse    76 QVFSQDGDGHMTLENFLDMFSVMSEMAPRDL--KAYYAFKIYDFNNDNYICAWDLEQTVTRLTRG 138

  Fly   136 ELS--EIILAIHELMGRRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLK 191
            |||  |:.|.                     .::|..:.|.:|||.:::|:|....|:
Mouse   139 ELSAEEVTLV---------------------CEKVLDEADGDQDGRLSLEDFQNMILR 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 42/188 (22%)
Cib3XP_006509731.1 FRQ1 6..178 CDD:227455 42/188 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.