Protein Alignment CG5890 and chpf-1

DIOPT Version :9

• Sequence 1: NP_001356889.1
• Gene: CG5890 / 43126
• FlyBaseID: FBgn0039380
• Length: 229
• Species: Drosophila melanogaster
• Sequence 2: NP_001379127.1
• Gene: chpf-1 / 179415
• WormBaseID: WBGene00014109
• Length: 195
• Species: Caenorhabditis elegans
• Alignment Length: 183
• Identity: 44/183 - (24%)
• Similarity: 84/183 - (45%)
• Gaps: 28/183 - (15%)

  Fly    29 LEDLCRQTKFTKQEIRVMYRGFKT--ECPEGVVHEDCFKDI-YAKFFPHGNSSLYAHYVFKAFDV 90
            :|::..:|:|.:.:|..:|..|.:  :..:|.:..|.|.:: .....|.|:..:.|.:..    .
 Worm    14 IEEIMSETEFNRNQIVRLYSRFLSLDKKGQGFLSRDDFLNVPELAVNPLGDRIVDAFFTL----A 74

  Fly    91 NCNG-----AISFRD---LLVTLSTLLR------GSVYERLRWTFKLYDLNGDGRISRGELSEII 141
            :.||     .::||.   :|.....:.|      .|..::|.:.||:||||.:..|:|.|...|
 Worm    75 SSNGDNEEQQLNFRQFVRILAHFQPISRVKKNALNSRKDKLLFAFKMYDLNKNDYITREEFKVI- 138

  Fly   142 LAIHELMGRRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDL 194
              ::.::|......:.|:.|    ||...:.|.::||.|:.:||..|..|.|:
 Worm   139 --LNSMVGANITSDQLDKIA----DRTIEEADADRDGKISFDEFCRAMEKTDI 185

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5890	NP_001356889.1	FRQ1	29..192	CDD:227455	42/179 (23%)
chpf-1	NP_001379127.1	FRQ1	14..182	CDD:227455	42/178 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910