DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5890 and LOC1279002

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_061511807.1 Gene:LOC1279002 / 1279002 VectorBaseID:AGAMI1_014683 Length:342 Species:Anopheles gambiae


Alignment Length:204 Identity:100/204 - (49%)
Similarity:145/204 - (71%) Gaps:5/204 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASPPESPIEEVVYELEHTRVP-KPIPVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFK 65
            |.|..|.:|.   |.|...|| :..|.:|.:|.|..:||::||:.:|||||.|||.|:|.|:.||
Mosquito   139 ADPDASSLEP---EAEDLPVPARYYPDSLVELTRTARFTEEEIKRIYRGFKAECPTGIVKEETFK 200

  Fly    66 DIYAKFFPHGNSS-LYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGD 129
            .||::|||.|.|| .||||||.:.|::.||::||.:.:..||.||||:|.|:|:|||.|||:|||
Mosquito   201 GIYSQFFPLGASSGQYAHYVFNSIDLDRNGSLSFEEFVANLSILLRGTVDEKLQWTFSLYDINGD 265

  Fly   130 GRISRGELSEIILAIHELMGRRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDL 194
            |.|::.|:.||:.||:||||:.|...|:::..:|:|:|:|.|:|.|.||.||::||:|.|.||:.
Mosquito   266 GCITKEEMKEIVTAIYELMGKVPEGCEEEQAIKDKVERLFEKMDRNCDGKITLDEFIECCTKDES 330

  Fly   195 VTRSLQMFD 203
            :.||:.:||
Mosquito   331 IRRSIAVFD 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 55/107 (51%)
LOC1279002XP_061511807.1 None

Return to query results.
Submit another query.