DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5890 and Guca1b

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_036016150.1 Gene:Guca1b / 107477 MGIID:1194489 Length:230 Species:Mus musculus


Alignment Length:168 Identity:58/168 - (34%)
Similarity:89/168 - (52%) Gaps:32/168 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EIRVMYRGFKTECPEGV--VHEDCFKDIYAKFFP-HGN--SSLYAHYVFKAFDVNCNGAISFRDL 101
            |::..|:.|..|||.|.  :||      :.:||. .||  :|.|...:|:|||.|.:..|.|.:.
Mouse    20 ELQEWYKKFVVECPSGTLFMHE------FKRFFKVTGNEEASQYVESMFRAFDKNGDNTIDFLEY 78

  Fly   102 LVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQPEDDRKARDQ-- 164
            :..|:.:||||:..:|:||||:||.:.:|.|.|.||.:|:.||::|  ::..:.|.|.:.:.|  
Mouse    79 VAALNLVLRGSLEHKLKWTFKIYDKDRNGCIDRLELLDIVEAIYKL--KKACRAELDLEHQGQLL 141

  Fly   165 -----VDRVFRKLDLNQDGIITIEEFLEACLKDDLVTR 197
                 |||:|..:|.|.||            |.|.|.|
Mouse   142 TPEEVVDRIFLLVDENGDG------------KRDAVCR 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 54/161 (34%)
Guca1bXP_036016150.1 FRQ1 15..161 CDD:227455 54/160 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833444
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.