DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and klhl17

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_004916201.1 Gene:klhl17 / 100491332 XenbaseID:XB-GENE-977875 Length:627 Species:Xenopus tropicalis


Alignment Length:156 Identity:36/156 - (23%)
Similarity:55/156 - (35%) Gaps:46/156 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGV------VHEDCFKDIYAKFFPHGNSSLYAHYV 84
            |.|||.|. |..:| .||.|.....:|..|...      |.:.|.|.:.::..|.          
 Frog   125 PQALEQLV-QYAYT-AEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPS---------- 177

  Fly    85 FKAFDVNCNGAISFRDLLVTLSTLLRGSVYERLRWTF---------------KLYDLNGDGRISR 134
                  ||.|...|.| ..:.|.||: |.::.:...|               ::.||.....::.
 Frog   178 ------NCLGIRGFAD-THSCSDLLK-SAHKYVLQHFVEVSKTEEFMLLPLKQVLDLISSDSLNV 234

  Fly   135 GELSEIILAI-----HELMGRRPHQP 155
            ....|:..|:     |::.|||.|.|
 Frog   235 PSEEEVYRAVLNWVKHDVDGRRQHVP 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 34/153 (22%)
klhl17XP_004916201.1 BTB_POZ_KLHL17_actinfilin 38..176 CDD:349555 15/52 (29%)
PHA03098 77..543 CDD:222983 36/156 (23%)
KELCH repeat 321..360 CDD:276965
KELCH repeat 364..407 CDD:276965
KELCH repeat 411..454 CDD:276965
KELCH repeat 458..502 CDD:276965
KELCH repeat 505..549 CDD:276965
KELCH repeat 552..597 CDD:276965
Kelch 564..608 CDD:128874
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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