DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and guca1b

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_002933553.1 Gene:guca1b / 100489509 XenbaseID:XB-GENE-22172599 Length:197 Species:Xenopus tropicalis


Alignment Length:171 Identity:58/171 - (33%)
Similarity:100/171 - (58%) Gaps:20/171 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EIRVMYRGFKTECPEGV--VHEDCFKDIYAKFF---PHGNSSLYAHYVFKAFDVNCNGAISFRDL 101
            |::..|:.|..|||.|.  :||      :.:||   .:..::.|..::|:|||.|.:..|.|.:.
 Frog    18 ELQEWYKKFVVECPSGTLFMHE------FKRFFGVADNQEAADYVEHMFRAFDKNGDNTIDFLEY 76

  Fly   102 LVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHEL--MGRRPHQPEDDR----K 160
            :..|:.:|||.:..:|:||||:||.:|:|.|.:.||.||:.:|:.|  :.||   .:|:|    .
 Frog    77 VAALNLVLRGKLEHKLKWTFKVYDRDGNGCIDKAELLEIVESIYNLKKVCRR---GQDERTPLLS 138

  Fly   161 ARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQM 201
            ..:.|:|:|:.:|.|.||.::::||::...||..|.:.|||
 Frog   139 PEEVVERIFQLVDENGDGQLSLDEFVDGARKDKWVMKMLQM 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 41/113 (36%)
guca1bXP_002933553.1 FRQ1 32..169 CDD:444056 46/145 (32%)

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