DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and guca1b

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_002933553.1 Gene:guca1b / 100489509 XenbaseID:XB-GENE-22172599 Length:197 Species:Xenopus tropicalis


Alignment Length:171 Identity:58/171 - (33%)
Similarity:100/171 - (58%) Gaps:20/171 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EIRVMYRGFKTECPEGV--VHEDCFKDIYAKFF---PHGNSSLYAHYVFKAFDVNCNGAISFRDL 101
            |::..|:.|..|||.|.  :||      :.:||   .:..::.|..::|:|||.|.:..|.|.:.
 Frog    18 ELQEWYKKFVVECPSGTLFMHE------FKRFFGVADNQEAADYVEHMFRAFDKNGDNTIDFLEY 76

  Fly   102 LVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHEL--MGRRPHQPEDDR----K 160
            :..|:.:|||.:..:|:||||:||.:|:|.|.:.||.||:.:|:.|  :.||   .:|:|    .
 Frog    77 VAALNLVLRGKLEHKLKWTFKVYDRDGNGCIDKAELLEIVESIYNLKKVCRR---GQDERTPLLS 138

  Fly   161 ARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQM 201
            ..:.|:|:|:.:|.|.||.::::||::...||..|.:.|||
 Frog   139 PEEVVERIFQLVDENGDGQLSLDEFVDGARKDKWVMKMLQM 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 52/160 (33%)
guca1bXP_002933553.1 FRQ1 1..166 CDD:227455 52/156 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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