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Protein Alignment CG5890 and ccdc181
DIOPT Version :9
Sequence 1: | NP_001356889.1 |
Gene: | CG5890 / 43126 |
FlyBaseID: | FBgn0039380 |
Length: | 229 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_012813116.1 |
Gene: | ccdc181 / 100380036 |
XenbaseID: | XB-GENE-972794 |
Length: | 471 |
Species: | Xenopus tropicalis |
Alignment Length: | 189 |
Identity: | 41/189 - (21%) |
Similarity: | 64/189 - (33%) |
Gaps: | 59/189 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 KQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCNGAISFRDLLVT 104
|.|....|:...||..|. :...|:.....|..|....: |.|....:.|:|.||.
Frog 78 KDETEAEYQDNDTEDEEA-------RRYIAEKIEEANKLLQTEII----DENRERKLKFKDNLVD 131
Fly 105 LSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHEL-----MGRRPHQPEDDRKARDQ 164
|... ..:.:::..:...|..| ||:..:.:| .|...|: ||:.:.::
Frog 132 LEVP-----------PVEYHEMKDERNESADE--EIVDGLSQLHLSNATGTNEHR--DDKGSTEE 181
Fly 165 VDRVFRKLDLNQDGIITIEEFLEACLKD---DLVTRSLQMFDNDLXXQEGELEPGLRNS 220
.:||.|.|| || :|||.| |: | ...|.:.||
Frog 182 ----------QKDGKILIE-------KDGKFELVTLS------DIESQ--SFLPPINNS 215
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5890 | NP_001356889.1 |
FRQ1 |
29..192 |
CDD:227455 |
30/156 (19%) |
ccdc181 | XP_012813116.1 |
MDN1 |
<4..182 |
CDD:227596 |
25/139 (18%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C165162846 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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