DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5890 and XB5856770

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001096526.1 Gene:XB5856770 / 100125166 XenbaseID:XB-GENE-5856771 Length:211 Species:Xenopus tropicalis


Alignment Length:161 Identity:52/161 - (32%)
Similarity:92/161 - (57%) Gaps:4/161 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EIRVMYRGFKTECPEGVV--HEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCNGAISFRDLLVT 104
            |:...||.|..|||.|::  ||  |:..:........||.||..:|:..|.|.:|.:.||:.:..
 Frog    17 ELHEWYRKFVQECPSGLITLHE--FRKYFCDCTVGTESSEYAEKIFRNLDKNGDGIVDFREYVTA 79

  Fly   105 LSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQPEDDRKARDQVDRVF 169
            :|.|.:||..|:|||:|:|||.:.||.|:|.|:.:|:.|::::.........:...|.:..:|:|
 Frog    80 ISMLAQGSPEEKLRWSFELYDKDRDGTITRCEMLDIMKAVYKMSLATSLAQSNPPTAEECTNRIF 144

  Fly   170 RKLDLNQDGIITIEEFLEACLKDDLVTRSLQ 200
            .:||.:.:.:|:::||::..|.||.:...|:
 Frog   145 IRLDKDHNALISLQEFIDGSLDDDWIRDMLE 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 35/107 (33%)
XB5856770NP_001096526.1 FRQ1 31..163 CDD:444056 41/133 (31%)
EFh 55..117 CDD:238008 26/61 (43%)

Return to query results.
Submit another query.