DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and dnaaf10

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001096516.1 Gene:dnaaf10 / 100125149 XenbaseID:XB-GENE-980477 Length:358 Species:Xenopus tropicalis


Alignment Length:92 Identity:22/92 - (23%)
Similarity:39/92 - (42%) Gaps:16/92 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASPPESPIEEVVYELEHTRVPKPIPVALEDLCRQTKFTKQEIRV--MYRG------FKTECPEG 57
            |:||.|.|  :::     ..|.||:...|.| |:....:.:.:.|  :.||      ::.:..|.
 Frog     1 MSSPLEKP--QII-----AHVQKPVTYTLFD-CKWIPCSAKFVCVGNLARGSGVLQVYEIQQGEA 57

  Fly    58 VVHEDCFKDIYAKFFPHGNSSLYAHYV 84
            .:.::..|....|....|.|||...|:
 Frog    58 KLLQEAEKPKPIKCGTFGASSLQQRYL 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 14/64 (22%)
dnaaf10NP_001096516.1 WD40 repeat 22..65 CDD:293791 7/43 (16%)
WD40 26..349 CDD:330360 11/59 (19%)
WD 1 64..106 7/21 (33%)
WD40 repeat 70..110 CDD:293791 6/15 (40%)
WD40 repeat 115..158 CDD:293791
WD 2 116..155
WD 3 163..206
WD40 repeat 169..208 CDD:293791
WD 4 208..250
WD40 repeat 213..257 CDD:293791
WD 5 258..298
WD40 repeat 263..319 CDD:293791
WD 6 320..358
WD40 repeat 325..349 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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