DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and lpcat2

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_012815924.2 Gene:lpcat2 / 100124943 XenbaseID:XB-GENE-946438 Length:569 Species:Xenopus tropicalis


Alignment Length:216 Identity:43/216 - (19%)
Similarity:83/216 - (38%) Gaps:68/216 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASPPESPIEEVVYE-------------------LEHTRVPKPIPVALEDLCRQTKFTKQEIRVM 46
            ||.....|:.:..||                   :|.|::.|.:.:..:.:.:|.:        :
 Frog   326 MAQALGLPVTDHTYEDCRLMMTAGELTLPMETGLVEFTKISKKLNLKWDSIKKQLE--------V 382

  Fly    47 YRGFKTECPEGVVHEDCF--------KDIYAKFFPHGNSSLYAHYVFKAFDVNCNGAISFRDLLV 103
            :......|..|.:..:.|        .|:..:             :|..||.|.:|.|.||:.::
 Frog   383 FASIAGSCKGGRIGIEEFANHLKLPVSDVLRE-------------LFSLFDRNKDGTIDFREYVI 434

  Fly   104 TLSTLLR-GSVYERLRWTFKLYDLNGDGRISRGELSEII---LAIHELMGRRPHQPEDDRKARDQ 164
            .::.|.. .:..|.::..|||:|::.||.|:..|.|.::   |.:.:|                .
 Frog   435 GVAILCNPANTEETIKMAFKLFDVDEDGSITEDEFSSLLQSSLGVPDL----------------D 483

  Fly   165 VDRVFRKLDLNQDGIITIEEF 185
            |.::||.:|.:..|.|:.|||
 Frog   484 VSKLFRDMDADNSGKISYEEF 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 35/169 (21%)
lpcat2XP_012815924.2 LPLAT_LPCAT1-like 132..343 CDD:153253 5/16 (31%)
FRQ1 359..509 CDD:227455 38/183 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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