DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and guca1a

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001096291.1 Gene:guca1a / 100124863 XenbaseID:XB-GENE-22061924 Length:203 Species:Xenopus tropicalis


Alignment Length:192 Identity:71/192 - (36%)
Similarity:106/192 - (55%) Gaps:29/192 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGN----SSLYAHYVFKAF 88
            |:|:|      :..||...|:.|.||||.|.:.:..||    :||...|    |:.|...:|..|
 Frog     8 AVEEL------SATEIHQWYKKFMTECPSGQLTQHEFK----QFFNLKNLSPASNQYIEQMFNTF 62

  Fly    89 DVNCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPH 153
            |.|.:|.:.|.:.:..||.:|:|.|.::|:|.|||||::|:|.|.||||..||.||     |..:
 Frog    63 DFNKDGYMDFMEYVAALSLVLKGKVEQKLKWYFKLYDVDGNGCIDRGELLNIIKAI-----RAIN 122

  Fly   154 QPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDD----LVTRSL------QMFDND 205
            :..:|..|.:..|.||.|:|:|.||.:::|||:|...:|:    ::||||      .|..||
 Frog   123 RCNEDMTAEEFTDMVFDKIDINGDGELSLEEFIEGVQRDEFLLNVLTRSLDLKHIVHMIQND 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 62/166 (37%)
guca1aNP_001096291.1 FRQ1 11..162 CDD:227455 61/165 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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