DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and kcnip1a

DIOPT Version :9

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_021326489.1 Gene:kcnip1a / 100008068 ZFINID:ZDB-GENE-080721-17 Length:230 Species:Danio rerio


Alignment Length:179 Identity:89/179 - (49%)
Similarity:130/179 - (72%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDV 90
            |..||.|..||.|.|:|::|:|||||.|||.|||:|:.||.||::|||||::|.||||:|.|||.
Zfish    50 PEGLEQLEAQTNFNKKELQVLYRGFKNECPSGVVNEETFKQIYSQFFPHGDASTYAHYLFNAFDS 114

  Fly    91 NCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQP 155
            :.||:|.|.|.:..||.||||:..|:|.|||.|||:|.||.|::.|:.:|:.||:::|||..:..
Zfish   115 SHNGSIKFEDFVTALSILLRGTTTEKLEWTFNLYDINRDGYINKEEMMDIVKAIYDMMGRFTYPA 179

  Fly   156 EDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQMFDN 204
            ......:..||..|:|:|.|:||::|::||:.:|.:|:.:.||||:|:|
Zfish   180 LKTDTPKQHVDAFFQKMDKNRDGVVTLDEFIVSCTEDENIMRSLQLFEN 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 81/162 (50%)
kcnip1aXP_021326489.1 FRQ1 53..219 CDD:227455 82/165 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576094
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H22824
Inparanoid 1 1.050 206 1.000 Inparanoid score I3687
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606780at33208
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 1 1.000 - - otm24851
orthoMCL 1 0.900 - - OOG6_101448
Panther 1 1.100 - - O PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.900

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