DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and kcnip1a

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_073778540.1 Gene:kcnip1a / 100008068 ZFINID:ZDB-GENE-080721-17 Length:247 Species:Danio rerio


Alignment Length:179 Identity:89/179 - (49%)
Similarity:130/179 - (72%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDV 90
            |..||.|..||.|.|:|::|:|||||.|||.|||:|:.||.||::|||||::|.||||:|.|||.
Zfish    67 PEGLEQLEAQTNFNKKELQVLYRGFKNECPSGVVNEETFKQIYSQFFPHGDASTYAHYLFNAFDS 131

  Fly    91 NCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQP 155
            :.||:|.|.|.:..||.||||:..|:|.|||.|||:|.||.|::.|:.:|:.||:::|||..:..
Zfish   132 SHNGSIKFEDFVTALSILLRGTTTEKLEWTFNLYDINRDGYINKEEMMDIVKAIYDMMGRFTYPA 196

  Fly   156 EDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQMFDN 204
            ......:..||..|:|:|.|:||::|::||:.:|.:|:.:.||||:|:|
Zfish   197 LKTDTPKQHVDAFFQKMDKNRDGVVTLDEFIVSCTEDENIMRSLQLFEN 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 49/107 (46%)
kcnip1aXP_073778540.1 None

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