DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5886 and txlnb

DIOPT Version :9

Sequence 1:NP_651435.1 Gene:CG5886 / 43125 FlyBaseID:FBgn0039379 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_002937003.2 Gene:txlnb / 100495851 XenbaseID:XB-GENE-876994 Length:593 Species:Xenopus tropicalis


Alignment Length:372 Identity:124/372 - (33%)
Similarity:226/372 - (60%) Gaps:25/372 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EKLSKAKKVA-REEKQRDQKLEE-----------LVMKSLDECPSAEEKVKLLLQRHVDSEKNVS 54
            ||:|.:..:: :....::||||:           |:::|:::..:||||::.|::::.:..:...
 Frog   135 EKISSSDVMSTKMPVNKEQKLEKTIIKGLGKDATLLLQSVNKLSTAEEKIEALIKKYAEMLEEYR 199

  Fly    55 RLTAELRVLQRQMESQQREKEQVQRDLNKSVLMRDKLQEVCREQQRIIKSVKNESLLQIKVEEER 119
            ....:|::||::.....:||:|:|.:.:|::|.|.||:.:|||.||..|::|.|::...:.:||:
 Frog   200 SEQKQLKLLQKRQVHLIKEKDQLQSEHSKAILARSKLESLCRELQRHNKTLKEETIQHAREDEEK 264

  Fly   120 RKESQTKFQSSLNDVQKSLAKNNEENIKLRDYNIEMTKKLKLLAEQYQTREQHLEKLNEQVQLEA 184
            |||....|||:|.::|..:.:.:|.|.||...|.|:.:|||.:..||:.||:||:|:.:|..|:.
 Frog   265 RKEITNHFQSTLTEIQTQIEQQSERNTKLCQENAELAEKLKNIVGQYELREEHLDKVFKQRDLQQ 329

  Fly   185 QLHQAKLQKCQVEAAMEKEILSK-ENQIGLEKLMQAQRAIKDLTDREHQLKEQLNIYTAKYDDFQ 248
            :|..|:|::.| |...|.|...| |....|.:..:.:...|.|.::|..||.|:.:|:.::|:||
 Frog   330 KLVDARLEQAQ-EMMKEAEAKHKREKDFLLTQAAEWKLQSKMLKEQEAVLKTQITLYSERFDEFQ 393

  Fly   249 QSLQKSNEVFGSYKVELEKMSKHTKKIEKEALGWRQKYEKANAMVIDLATEKSLQTQHSERLQKQ 313
            .||.|||:||.::|.|:|||:|..||:||:...|:.::|..|..::|:..|||::.:..:....:
 Frog   394 NSLTKSNDVFSTFKKEMEKMTKKMKKLEKDTSTWKTRFENCNKALLDMIEEKSVRAKEYDCFTLK 458

  Fly   314 IQQLQKLLRALQLERTTLHKCLRD---HEIEIPALPQLPPEPEPVNV 357
            ||:|:||.||||.||..|::.:::   ||||        .:.:.||:
 Frog   459 IQRLEKLCRALQEERIELYRKIKEAKVHEIE--------EDEDDVNI 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5886NP_651435.1 Taxilin 22..328 CDD:286771 109/317 (34%)
txlnbXP_002937003.2 Taxilin 166..473 CDD:286771 108/307 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 207 1.000 Domainoid score I2818
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I3485
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D532685at33208
OrthoFinder 1 1.000 - - FOG0001051
OrthoInspector 1 1.000 - - otm48470
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.