DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha4GT2 and A4galt

DIOPT Version :9

Sequence 1:NP_651434.3 Gene:alpha4GT2 / 43124 FlyBaseID:FBgn0039378 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_071576.1 Gene:A4galt / 63888 RGDID:621583 Length:360 Species:Rattus norvegicus


Alignment Length:288 Identity:90/288 - (31%)
Similarity:137/288 - (47%) Gaps:20/288 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 NIFFHETTNFKRIEKSSVVQLTAREACAIESAALHNPGLTVFVLFAGATHRPSSGDPL---IRAL 167
            ||||.||::  |...|.:..      |::||||..:|...|.||..|.. |.::..|.   |..|
  Rat    85 NIFFLETSD--RTNPSFLFM------CSVESAARAHPESQVVVLMKGLP-RDTTAWPRNLGISLL 140

  Fly   168 HNYKNIRLRHLNLWRYAAGTPIAKWLKSGKLFKSKFLFPHVSDLLRYVSLYKYGGLYLDLDVVVQ 232
            ..:.|:::|.|:|......||:|.|....:.....:|.|.:||..|...|:|:||:|||.|.:|.
  Rat   141 SCFPNVQIRPLDLQELFEDTPLAAWYLEAQHRWEPYLLPVLSDASRIALLWKFGGIYLDTDFIVL 205

  Fly   233 QNLEKLPPNFTGAESNISVACGVMKMSPGGLGHKIATMCLRDLEANYNANKWGTNGPGVITRVVK 297
            :||..| .|..|.:|...:....:...   ..|:...:|:||..|:||...||..||.::|||.|
  Rat   206 KNLRNL-TNMLGIQSRYVLNGAFLAFE---RKHEFLALCIRDFVAHYNGWIWGHQGPQLLTRVFK 266

  Fly   298 KQCNTDNIKSVINNPKRCNGFKVFDANAFYAISWLQWKDFFQPNRHNVTMKRVSKSPVIHVWNKF 362
            |.|:..::|    ..:.|.|.......|||.|.|..||.:|:........:.::.:..:|||||.
  Rat   267 KWCSIHSLK----ESRACRGVTALPPEAFYPIPWQNWKKYFEDVSPEELAQLLNATYAVHVWNKK 327

  Fly   363 SKGWKVKTKSNCAYTTLAKIHCPRSFAA 390
            |:|..::..|......|...:||.:..|
  Rat   328 SQGTHLEATSRALLAQLHARYCPTTHRA 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha4GT2NP_651434.3 Gly_transf_sug 129..241 CDD:303104 39/114 (34%)
Gb3_synth 265..391 CDD:282437 40/126 (32%)
A4galtNP_071576.1 Gly_transf_sug 98..221 CDD:282357 43/130 (33%)
DXD motif 199..201 1/1 (100%)
Gb3_synth 234..356 CDD:282437 40/126 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349193
Domainoid 1 1.000 92 1.000 Domainoid score I7424
eggNOG 1 0.900 - - E1_KOG1928
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9690
Inparanoid 1 1.050 153 1.000 Inparanoid score I4247
OMA 1 1.010 - - QHG47281
OrthoDB 1 1.010 - - D1082380at2759
OrthoFinder 1 1.000 - - FOG0000423
OrthoInspector 1 1.000 - - mtm8928
orthoMCL 1 0.900 - - OOG6_104694
Panther 1 1.100 - - O PTHR12042
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X281
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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