DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha4GT2 and A4GALT

DIOPT Version :9

Sequence 1:NP_651434.3 Gene:alpha4GT2 / 43124 FlyBaseID:FBgn0039378 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001304967.1 Gene:A4GALT / 53947 HGNCID:18149 Length:353 Species:Homo sapiens


Alignment Length:322 Identity:95/322 - (29%)
Similarity:148/322 - (45%) Gaps:25/322 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QSKFKLDKVSKKIPVIPLLDVLKAKKQPSRGQNIFFHETTNFKRIEKSSVVQLTAREACAIESAA 138
            :.|.:|..:..:||...|.........|:.| ||||.||::  |...:.:..      |::||||
Human    47 KEKGQLYNLPAEIPCPTLTPPTPPSHGPTPG-NIFFLETSD--RTNPNFLFM------CSVESAA 102

  Fly   139 LHNPGLTVFVLFAGATHRPSSGDPL-----IRALHNYKNIRLRHLNLWRYAAGTPIAKWLKSGKL 198
            ..:|...|.||..|.   |.....|     |..|..:.|:::..|:|......||:|.|..:.:.
Human   103 RTHPESHVLVLMKGL---PGGNASLPRHLGISLLSCFPNVQMLPLDLRELFRDTPLADWYAAVQG 164

  Fly   199 FKSKFLFPHVSDLLRYVSLYKYGGLYLDLDVVVQQNLEKLPPNFTGAESNISVACGVMKMSPGGL 263
            ....:|.|.:||..|...::|:||:|||.|.:|.:||..| .|..|.:|...:....:...   .
Human   165 RWEPYLLPVLSDASRIALMWKFGGIYLDTDFIVLKNLRNL-TNVLGTQSRYVLNGAFLAFE---R 225

  Fly   264 GHKIATMCLRDLEANYNANKWGTNGPGVITRVVKKQCNTDNIKSVINNPKRCNGFKVFDANAFYA 328
            .|:...:|:||...:||...||..||.::|||.||.|   :|:|:..: :.|.|.......|||.
Human   226 RHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKWC---SIRSLAES-RACRGVTTLPPEAFYP 286

  Fly   329 ISWLQWKDFFQPNRHNVTMKRVSKSPVIHVWNKFSKGWKVKTKSNCAYTTLAKIHCPRSFAA 390
            |.|..||.:|:........:.:|.:..:|||||.|:|.:.:..|......|...:||.:..|
Human   287 IPWQDWKKYFEDINPEELPRLLSATYAVHVWNKKSQGTRFEATSRALLAQLHARYCPTTHEA 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha4GT2NP_651434.3 Gly_transf_sug 129..241 CDD:303104 37/116 (32%)
Gb3_synth 265..391 CDD:282437 41/126 (33%)
A4GALTNP_001304967.1 Gly_transf_sug 94..214 CDD:327708 40/129 (31%)
DXD motif. /evidence=ECO:0000250 192..194 1/1 (100%)
Gb3_synth 227..349 CDD:309631 41/126 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155306
Domainoid 1 1.000 94 1.000 Domainoid score I7483
eggNOG 1 0.900 - - E1_KOG1928
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9690
Inparanoid 1 1.050 156 1.000 Inparanoid score I4301
Isobase 1 0.950 - 0 Normalized mean entropy S7577
OMA 1 1.010 - - QHG47281
OrthoDB 1 1.010 - - D1082380at2759
OrthoFinder 1 1.000 - - FOG0000423
OrthoInspector 1 1.000 - - mtm8452
orthoMCL 1 0.900 - - OOG6_104694
Panther 1 1.100 - - O PTHR12042
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X281
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.720

Return to query results.
Submit another query.