DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha4GT2 and A4galt

DIOPT Version :9

Sequence 1:NP_651434.3 Gene:alpha4GT2 / 43124 FlyBaseID:FBgn0039378 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_036015294.1 Gene:A4galt / 239559 MGIID:3512453 Length:359 Species:Mus musculus


Alignment Length:288 Identity:88/288 - (30%)
Similarity:133/288 - (46%) Gaps:20/288 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 NIFFHETTNFKRIEKSSVVQLTAREACAIESAALHNPGLTVFVLFAGATHRPSSGDPL---IRAL 167
            ||||.||::  |...:.:..      |::||||..:|...|.||..|.. |.::..|.   |..|
Mouse    84 NIFFLETSD--RTSPNFLFM------CSVESAARAHPESQVVVLMKGLP-RDTTAQPRNLGISLL 139

  Fly   168 HNYKNIRLRHLNLWRYAAGTPIAKWLKSGKLFKSKFLFPHVSDLLRYVSLYKYGGLYLDLDVVVQ 232
            ..:.|:.:|.|:|......||:|.|....:.....:..|.:||..|...|:|:||:|||.|.:|.
Mouse   140 SCFPNVWIRPLDLQELFEDTPLAAWYSEARHRWEPYQLPVLSDASRIALLWKFGGIYLDTDFIVL 204

  Fly   233 QNLEKLPPNFTGAESNISVACGVMKMSPGGLGHKIATMCLRDLEANYNANKWGTNGPGVITRVVK 297
            :||..| .|..|.:|...:....:...   ..|:...:||.|..||||...||..||.::|||.|
Mouse   205 KNLLNL-TNTLGIQSRYVLNGAFLAFE---RKHEFLALCLHDFVANYNGWIWGHQGPQLLTRVFK 265

  Fly   298 KQCNTDNIKSVINNPKRCNGFKVFDANAFYAISWLQWKDFFQPNRHNVTMKRVSKSPVIHVWNKF 362
            |.|:..:::    ....|.|.......|||.|.|..||.:|:........:.::.:..:|||||.
Mouse   266 KWCSIQSLE----KSHACRGVTALPPEAFYPIPWQNWKKYFEDISPEELTQLLNATYAVHVWNKK 326

  Fly   363 SKGWKVKTKSNCAYTTLAKIHCPRSFAA 390
            |:|..::..|......|...:||.:..|
Mouse   327 SQGTHLEATSKALLAQLHARYCPTTHRA 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha4GT2NP_651434.3 Gly_transf_sug 129..241 CDD:303104 38/114 (33%)
Gb3_synth 265..391 CDD:282437 40/126 (32%)
A4galtXP_036015294.1 Gly_transf_sug 100..220 CDD:398274 41/127 (32%)
Gb3_synth 233..355 CDD:398326 40/126 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845775
Domainoid 1 1.000 94 1.000 Domainoid score I7455
eggNOG 1 0.900 - - E1_KOG1928
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9690
Inparanoid 1 1.050 156 1.000 Inparanoid score I4275
Isobase 1 0.950 - 0 Normalized mean entropy S7577
OMA 1 1.010 - - QHG47281
OrthoDB 1 1.010 - - D1082380at2759
OrthoFinder 1 1.000 - - FOG0000423
OrthoInspector 1 1.000 - - mtm8691
orthoMCL 1 0.900 - - OOG6_104694
Panther 1 1.100 - - O PTHR12042
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X281
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.720

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