DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha4GT2 and LOC100497034

DIOPT Version :9

Sequence 1:NP_651434.3 Gene:alpha4GT2 / 43124 FlyBaseID:FBgn0039378 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_002941965.2 Gene:LOC100497034 / 100497034 -ID:- Length:338 Species:Xenopus tropicalis


Alignment Length:304 Identity:95/304 - (31%)
Similarity:135/304 - (44%) Gaps:34/304 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 SRGQNIFFHETTNFKRIEKSSVVQLTAREACAIESAALHNPGLTVFVLFAGATHRPSSGDPLIRA 166
            |.|..|||.|||:  |::..|:|      .||:||||..||...|.....|.....|..|. .||
 Frog    47 SPGNGIFFIETTD--RMDPPSLV------LCAVESAARINPDRPVAFFMKGLPDINSVEDQ-NRA 102

  Fly   167 LHN------YKNIRLRHLNLWRYAAGTPIAKWLKSGKLFKSKFLFPHV-SDLLRYVSLYKYGGLY 224
            |.:      |.||.|..|.:......||:..|.:.....| :..:.|| ||..|...:|||||||
 Frog   103 LDSFPTLAPYNNIYLFPLRMDILLKDTPLLPWYQQVNPEK-EVHWAHVSSDASRLALMYKYGGLY 166

  Fly   225 LDLDVVVQQNLEKLP-PNFTGAESNISVACGVMKMSPGGLGHKIAT-MCLRDLEANYNANKWGTN 287
            :|.|::   :|..:| .||..||||...:.||.    |...|:..| .|:.|...|||...||..
 Frog   167 MDTDII---SLRPVPVENFLVAESNQLSSNGVF----GFNSHRDFTWTCMEDFVKNYNGAIWGHQ 224

  Fly   288 GPGVITRVVKK-QCNTDNIKSVINNPKRCNGFKVFDANAFYAISWLQWKDFFQPNRHNVTMKRVS 351
            ||.:.|||::: .|:....|.  :...:|......:...||.|....|..||:..:...|.   .
 Frog   225 GPALFTRVLRQFYCDIPPFKG--DEDLKCGNVSFLNPRRFYPIECRFWMRFFEVWKAFPTF---V 284

  Fly   352 KSPVIHVWNKFSKGWK--VKTKSNCAYTTLAKIHCPRSFAAAGE 393
            .|..:|::|..::|.:  :...||.....|...:||.::.|..|
 Frog   285 DSYALHLFNYANRGERRVMVPGSNTLVEHLYVQNCPATYEAVLE 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha4GT2NP_651434.3 Gly_transf_sug 129..241 CDD:303104 40/119 (34%)
Gb3_synth 265..391 CDD:282437 33/129 (26%)
LOC100497034XP_002941965.2 Gly_transf_sug 64..176 CDD:388717 41/122 (34%)
Gb3_synth 204..326 CDD:368001 32/126 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9755
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4577
OMA 1 1.010 - - QHG47281
OrthoDB 1 1.010 - - D503304at33208
OrthoFinder 1 1.000 - - FOG0000423
OrthoInspector 1 1.000 - - mtm9340
Panther 1 1.100 - - O PTHR12042
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X281
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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